Coregonus clupeaformis (lake whitefish): 121550401
Help
Entry
121550401 CDS
T08357
Symbol
atp13a1
Name
(RefSeq) manganese-transporting ATPase 13A1
KO
K14950
manganese-transporting P-type ATPase [EC:7.2.2.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121550401 (atp13a1)
Transporters [BR:
cclu02000
]
Other transporters
Primary active transporters [TC:
3
]
121550401 (atp13a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2TM_P5A-ATPase
E1-E2_ATPase
Hydrolase
Cation_ATPase
Hydrolase_3
VWA_2
Motif
Other DBs
NCBI-GeneID:
121550401
NCBI-ProteinID:
XP_041718580
LinkDB
All DBs
Position
35:1886873..1902800
Genome browser
AA seq
1199 aa
AA seq
DB search
MNAATKLGNMVSEDGNQGPGELQMAPSMNSQHDSAETDDENVSSVSLYRRRPRLFHGTVL
PFLAVLYPGWLYVWLGVYGTSEYPEAGLLALAAIGIAHVLTALSGYWSVHAHCWLTCSKE
PDPHKATLAKVIPTPNNGSAELVPLQRDRDENGEGILSFEFQKICYIFDNKERKCFLPVS
FPVRQPMGFFQAWRGYQEETDLRAAEKRYGTNRAEMMVPDFLELFRERATAPFFVFQVFC
VGLWCLDEYWYYSVFTLFMLVAFEASLVQQQMRNMSEIRRMGNKPYMIQVYRNRKWRPVS
SDELVPGDIVSIGRSPQENLVPCDVLLLRGRCIVDEAMLTGESVPQMKEPVEDLDPERVL
DLQGDARLHIISGGTKVVQHSPPLRATVGLKPVDNGCVAYVLRTGFYTSQGKLLRTILFG
VKRVTANNLETFIFILFLLVFAIAAAGYVWVEGTKDPSRNRYKLFLECTLILTSVVPPEL
PIELSLAVNTSLIALAKLYVFCTEPFRIPFAGKVEVCCFDKTGTLTSDHLVVRGVAGLRE
GKEVMPVSEIPVETHRVVATCHSLVTLDDGQLVGDPLEKAMLTAADWTLTKDEKVFARGI
KTPGLKIHQRFHFASALKRMSVLASYEKLGSTDLCYVSTVKGAPETLRDMFSECPASYDQ
VHREMSREGARVLALGYKEIGHLSHQQVREVTRDALECDLQFAGFMVVSCPLKTDSKAVI
KEIQEASHHVVMITGDNPLTACHVARELHFIQKEHTLILQARPNQGEWQWESIDGSVCVP
LPPPSVPSLVDQYDLCVTGEGLTRLTCDTRLLHALLPHVRVFARVSPKQKEFVITSLKGL
GYTTLMCGDGTNDVGALKHAHIGVALLANAPERMPERRKRGKEKEAPAADSRPSLPPVTS
SGVKLTSRAARQRVMAQREEQLAAQKERISQVLKELEEDQIQVVKLGDASIAAPFTSKLS
SIQCICHVIKQGRCTLVTTLQMFKILALNALVLAYSQSVLYLEGVKFSDFQATLQGLLLA
GCFLFISRSKPLKTLSKERPLPNIFNLYTVLTVLLQFAVHFCSLVYLYKGAQSRSPPRAE
RFADLYKEFEPSLINSTVYIMSMAMQMATFAINYKGHPFMESLSENRPLLWSIALSGLAI
VGLLSGSSPEFNEQFALVDIPTEFKLVIAQVLVVDFVAALLVDRVLQFLLGKGTLRLPS
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcggctacgaaactggggaatatggtttcggaggacgggaatcaggggccgggg
gagctgcaaatggccccctctatgaacagccagcatgacagcgccgagactgacgacgag
aacgttagctcggtgtcgctgtatcggcgcaggccccggctattccacggcacggttcta
ccttttttagccgtgctgtaccctggctggttgtacgtgtggctcggagtgtacggtact
tccgagtacccagaggcaggcctactagctctcgccgccatcgggatcgcgcacgtcctc
acagcgctctctggttattggtccgtgcacgcgcattgttggctcacctgctccaaggag
ccagacccacacaaggccaccctggctaaggttatacccacccccaacaacggttctgct
gagctggtaccactgcagagagaccgggatgagaatggcgagggaatcctgtcctttgag
ttccagaagatctgctatatcttcgacaacaaggagaggaagtgtttcctccccgtgtcg
ttccccgtccgacagccaatgggcttcttccaagcctggcgaggctaccaggaggagaca
gacttgcgtgctgccgagaagcgctatgggaccaaccgcgctgagatgatggtgccggac
ttcctggaactcttcagggagagagccaccgctcccttctttgtcttccaggtgttctgt
gtgggtctgtggtgtctggatgagtactggtactacagcgtgttcactctcttcatgctg
gtggccttcgaagcctctctggtacaacagcagatgaggaacatgtctgagatacgacgc
atggggaacaaaccctacatgatccaggtttaccgcaacaggaagtggaggcctgtgtcc
agtgatgaactagtccccggggacatcgtctcaataggccgctcgccacaggagaacttg
gttccatgtgacgtgctgctgctgagagggcgctgcatcgtggacgaggcaatgctgacg
ggagagtctgttcctcagatgaaggaaccggtggaggatctggacccagagagggtcctg
gacctgcagggtgatgcccgcctccacatcatctctggtgggaccaaggtggtgcagcac
agccccccgctccgcgccactgtaggactcaaacctgtggacaatggctgtgtggcttat
gtgttgagaaccggattctatacctctcagggtaaactgctgaggaccatcctgtttgga
gtgaagagggtgacagccaacaacttggaaacattcatcttcatcctcttcctcctggtg
ttcgccatcgctgctgctggctatgtgtgggtggaagggactaaggacccgagcaggaac
cggtataagttgttcctggagtgtactctcatcctgacctccgtggttccacctgaactc
cctatagaattgtctctggcagtcaacacatccctcatcgctctggccaagctctatgtg
ttctgcactgagcccttcaggatcccgtttgcaggcaaggtggaggtgtgctgctttgac
aagacgggcaccttgaccagcgaccatctggtggtgcggggggtcgcaggcctcagagaa
gggaaagaagtgatgcctgtgtcagagatcccagtggaaacgcatcgggtggttgctact
tgtcactcactggttacccttgacgatggacagctggtaggcgaccccctggagaaggcc
atgctcactgctgctgactggaccctcactaaagatgaaaaggtgtttgctcgcggtata
aagaccccaggcctgaagatccaccagcggttccactttgccagtgctctgaagaggatg
tctgtcctggcctcctatgagaaactgggctccactgacctctgctatgtctccactgtc
aaaggagctccagagacactcagggacatgttctcagagtgcccagccagctatgaccag
gtacacagggagatgtcccgagaaggggccagggttctggccttgggctacaaagagatc
ggacacctcagccaccaacaggtgcgggaggtgactcgtgatgctctggagtgtgacctg
cagttcgccggcttcatggtcgtctcgtgtcccctgaagaccgacagcaaggctgtcatc
aaagagatccaggaggcatcgcatcacgtggtgatgataacaggtgacaatcctcttacc
gcgtgccatgtggccagagagctccacttcatccagaaggaacacacactcatactgcag
gccagacccaaccagggtgagtggcagtgggagtctatagacggcagtgtgtgtgttccg
ctgcccccgccatccgtcccctcattggtcgatcagtatgatctgtgtgtgacgggggag
gggctaaccagattgacctgtgacacgcggttgctccacgccctcctgccccatgtccgg
gtgttcgcacgggtcagccctaaacagaaggagtttgtaatcactagtctaaaaggattg
ggctatacaacattgatgtgcggagacgggaccaatgatgtcggagcactcaaacacgcc
catatcggtgtggctctgttggccaacgccccagagcggatgcctgaaaggaggaagagg
ggcaaagagaaggaggccccagcagcagactccagaccctccctacctccggtcaccagc
tcaggggtcaaactgacctccagggcagccaggcagagggtcatggcccagagagaggag
cagctagccgcacagaaggagaggatcagtcaagtattaaaggagctggaagaagatcag
atacaagtagtgaagctgggagacgcctccattgcggcccccttcacctccaaattgtcc
tccatacagtgcatctgccacgtgataaagcagggccgctgtacgctggtgaccacacta
cagatgtttaagatcctggcgttgaacgccctggtgctggcctacagccagtcagtcctc
tacctggagggggtcaagttcagtgacttccaggccaccctacagggcctgctattggcc
ggctgtttcctcttcatctccaggtcaaagcccctgaagactctgtctaaagagcggccc
ttaccaaacatattcaacctgtacactgttctgacagtgctgctgcagtttgctgttcac
ttctgtagtctggtatacctgtacaaaggagcgcagagcagaagtcctccaagggcggag
cggtttgcggacctgtacaaagagtttgagcccagtctcatcaacagcactgtgtacata
atgtctatggccatgcagatggctacctttgccattaactataagggtcatcctttcatg
gagtctctgagtgagaacagaccgctgctgtggagtattgccctgtcaggtctggccatc
gtgggccttctctcaggatcctcgccggaattcaacgagcagtttgctcttgtagatata
ccaacagagttcaagctagtcatcgcccaggtcctggtggttgactttgtcgctgccctg
ctggtcgaccgcgttctgcagttcctgctgggcaaaggcaccctgaggctgccttcctga
DBGET
integrated database retrieval system
