Coregonus clupeaformis (lake whitefish): 121550416
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Entry
121550416 CDS
T08357
Symbol
adarb1b
Name
(RefSeq) double-stranded RNA-specific editase 1 isoform X1
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121550416 (adarb1b)
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121550416 (adarb1b)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
121550416
NCBI-ProteinID:
XP_041718602
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All DBs
Position
4:complement(7695263..7870585)
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AA seq
747 aa
AA seq
DB search
MALFSTGPQSLGSYYCLIRRRFKRRRKKRSERQGGAGARQPRAQQKLFTMDVDEEENMSS
SSTDVKENRNLDNVSSKEGAAVGEQLPNGSGGGSRKRPLEEGNNGHTHSKFRAKKRKKTP
GPVLPKNALMQLNEIKPGLQYKLLSQTGPVHAPVFVMTVEVNGQLFEGSGPTKKKAKLNA
AEKALRSFVQFPNASEAHLAMGRTLTVNTDFTSDQADFPDMLFNGFETPAPPEDSFYLGS
NGSGSLNSLGEYPMPSTPGANLAQAPLPPPSSFTSPSSGKNPVMILNELRPGLKYDFVSE
SGESHAKNFVMQVSVDSQQFEGSGRNKKLAKARAAQAALSALFNMQLDQTPSRQPIPREG
LQLHLPQVLADAVSRLVVDKFSELTDNFTSPHARRKVLAGVVMTTGTDVKEAQVICVSTG
TKCINGEYMSDRGLALNDCHAEIIARRSLIRYLYAQLEHFLSNNKEEQQKSIFMRCDKRG
YRLKDNVQFHLYISTSPCGDARIFSPHEAGMEDQGDRHPNRKARGQLRTKIESGEGTIPV
RTSNTIQTWDGVLQGERLLTMSCSDKIARWNVLGIQGSLMSYFTEPIYFSSIILGSLYHA
DHLSRAMYQRIADIEDLPQQFSLNRPLLSGISNAEARQPGKAPNFSVNWVVGDQALEVIN
ATTGKDDMGRASRLCKHALYCRFIRLHSKLSSTLRIKVSKPSSYHDAKEAAVEYHNAKQT
LIKVFHKSGLGAWVKKPIEQDQFSLNS
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggccctgttcagcactgggccccagagcctgggctcctactactgcctcatccgcagg
aggttcaagaggaggcgcaagaaacgcagcgagcgccaaggtggagccggagctcggcag
ccccgggcccagcagaagctcttcaccatggacgtggatgaagaggagaacatgagttcg
agcagcactgacgttaaggaaaaccgtaacctggacaacgtctcctccaaagagggggca
gctgtaggcgagcagctccccaatggaagtggtgggggcagcaggaagcgccccctagag
gagggcaacaatggccacacgcactccaagttccgggccaagaagcgtaagaaaacgcca
ggcccagttctaccaaagaatgcccttatgcagctgaatgaaatcaagccagggctgcag
tataagctgctgtctcaaacgggtccggtccatgctcccgtatttgtcatgaccgttgag
gtcaatgggcagctgttcgagggctcaggtccgaccaagaagaaggccaagctgaatgcg
gcagagaaggccctgcgctcctttgtccagttccccaacgcctcagaggcgcacctggct
atgggccggacactgacagtcaacacggacttcacatccgatcaggccgacttcccagac
atgctcttcaacgggtttgagacacccgcaccgcccgaggactccttttacctgggatcc
aatggcagcggctccttaaactcgctgggagagtatcccatgccctccacgccaggtgct
aaccttgcccaggccccgttgccccctccctcctccttcacctcgccttcgagcggcaag
aatcctgtcatgatcctcaacgagctgaggccgggcctcaagtacgactttgtgtctgag
agcggtgagagccatgccaagaactttgtcatgcaggtgtcggtggactcgcagcagttt
gagggctcaggacgaaacaagaagctggccaaggcccgggccgcccaggcagctctctca
gccctcttcaacatgcagctggaccagacaccctcccgacagcccatccccagagaggga
ctgcagctccacctaccccaggttctcgccgacgccgtctctcgcctggtggtggacaag
ttcagcgagctgacggacaacttcacctccccccacgcgcgacggaaagtcctggcgggg
gtcgtcatgacaactggcacagacgtgaaagaggcccaagtgatctgcgtctccacgggc
accaagtgcatcaacggcgagtacatgagcgaccgcggcttggcactcaacgactgccac
gcagagattatcgcccgccgctcactcatccggtacctctacgcccagctggagcacttc
ctcagcaacaacaaggaggagcagcagaagtccatattcatgcgctgtgacaagcgtggc
taccggctaaaggacaacgtccagttccacctctacatcagcacctcgccctgcggagat
gcacgcatcttctcgccgcatgaggccggcatggaagaccaaggagaccgacaccccaac
cggaaggcgcggggccagctgaggaccaagatagagtctggggaagggaccatccctgtg
aggaccagcaacaccatccagacatgggatggggtgctgcagggagagaggctgctcacc
atgtcctgcagtgacaagatcgcaagatggaacgtgctgggcatccagggctctctgatg
agctacttcacagagcccatctacttctccagcatcatcctgggtagcctgtaccacgcc
gaccacctctcccgagccatgtaccagcgcattgctgacattgaggacttgccccaacag
tttagcctcaacaggcctctactgagcggcatcagcaacgcggaggcgaggcagccgggc
aaggcgcccaacttcagcgtgaactgggtggtgggcgaccaggcgctggaggtcatcaac
gccaccacgggcaaagacgacatggggcgcgcctcgcgtctctgcaagcacgccctctac
tgccgctttattcgcctgcactccaagttgtcctccacactgaggatcaaggtgtccaag
cccagctcgtaccacgacgccaaggaggcggcggtagagtaccacaacgccaagcagacg
ctgatcaaggtcttccacaagtcgggcctgggggcctgggtgaagaagcccatcgagcag
gaccagttctccctcaactcctga
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