Coregonus clupeaformis (lake whitefish): 121550418
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Entry
121550418 CDS
T08357
Symbol
nsun5
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cclu03009
]
121550418 (nsun5)
Enzymes [BR:
cclu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
121550418 (nsun5)
Ribosome biogenesis [BR:
cclu03009
]
Eukaryotic type
Other ribosome biogenesis factors
121550418 (nsun5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NSUN5_N
NSUN5_fdxn-like
Methyltr_RsmB-F
FtsJ
RsmF-B_ferredox
Motif
Other DBs
NCBI-GeneID:
121550418
NCBI-ProteinID:
XP_041718600
LinkDB
All DBs
Position
35:7360188..7369606
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AA seq
523 aa
AA seq
DB search
MALYTKAAEILEKVERKQATVKTLVYDSKFQNIKQLFALVCETQKFSSILQEIIESTKLL
KQTKIKMNLAKVLVYDLVIGKGLKCGGAWKALMMKHRSRLQAALARMKIKQKVSRNQDLL
PSSLQQPEGDQLPRYVRVNTLKTTVEDAIDYFKREGFSYLGQAYRLDDLNLKGKSFVGDL
HLSDLLVFSAKTDFHDHNLYKAGHIILQDKASCLPAYLLNPPTGSHVLDACAAPGNKTSH
LAAIMKNKGKLFAFDLDAKRLSTMSTLLLRAGITCQQLANQDFLKVDPDGPQYKDVEYIL
LDPSCSGSGMVCLRDEASPSQKEQDKRRLQALAAFQLHCLNHALRFPRLQRLVYSTCSIH
TEENEQVVAACMLQNPGFRLVPLLQQWPERGLAPLTQCLRASTTKTLTHGFFVALLERHT
AQSLEEQASKTLNPVTEMSPSSPSASKDIHEAEDADITEDGDEVQEPISTTKDNTETSGG
AKKKKRRRKKKKDGDKEALEPKTTEEQTDTSGGTKKKKNAKVE
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggctttgtacacgaaagctgccgagattctcgagaaagtggagaggaagcaggctact
gtaaagactttggtttacgatagtaaatttcagaatatcaagcagctttttgccctggtg
tgtgagacacagaagttttcatccattctccaagagatcattgagtccaccaaactcctt
aaacagactaagatcaaaatgaatctagccaaggttctggtgtatgacctggtcatcggt
aaggggctgaagtgtggcggagcctggaaggctctgatgatgaagcaccgctccagactg
caggctgccctggcccgcatgaagatcaagcagaaggtcagccgcaaccaggacctgctc
ccctccagtctccagcagcctgaaggcgatcagcttccgaggtatgtgcgtgtgaacacg
ttaaagaccacggtggaggatgccattgattacttcaagagagagggcttctcctactta
ggacaggcctacaggctcgatgacctgaatctgaaggggaaatcctttgtgggtgacctg
cacctttcagacctgctggttttctctgcaaagacagacttccatgaccacaatctgtac
aaggctggccacatcattctacaagacaaggccagctgtctccctgcgtacctcctgaac
cctcctacaggcagccacgtcctggatgcttgtgcagcgccggggaacaaaaccagccac
cttgctgccatcatgaaaaacaaagggaagctgtttgccttcgacctggatgccaagcgt
ctctccacaatgtccactctcctgctccgcgctggaatcacatgtcagcagctggccaat
caggacttcctaaaggtggacccggacgggccccagtataaagatgtggagtacatccta
ctggacccgtcgtgcagcggatcagggatggtgtgtctgcgggacgaggcctcgccctcc
caaaaggagcaggacaagcgtcgtctgcaggccttggcagcgttccagctgcactgtctc
aaccacgccctgcgcttcccccgcctgcagcgcctggtctactccacctgctccatccat
accgaggagaacgagcaagtggtggccgcctgcatgctgcagaacccaggcttcaggctt
gttccactgctccagcagtggcccgagcgtggtctggctcccctcacacagtgtctccga
gccagcaccaccaaaaccctcacccatggcttctttgtggccctgctggagcgacacaca
gcacagagtctagaagagcaggcctccaaaacactcaatccggtcactgagatgagtcca
agtagtccttctgccagtaaggacatccatgaggctgaagatgccgatatcacagaagat
ggggatgaggttcaggagcctattagcaccaccaaggataatacagaaacctcaggagga
gcaaagaagaagaagaggaggaggaagaaaaagaaagatggggataaggaggctctggag
cccaaaaccactgaggaacagacagatacctcaggaggaacaaagaaaaaaaagaatgct
aaagtggaatga
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