Coregonus clupeaformis (lake whitefish): 121550429
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Entry
121550429 CDS
T08357
Name
(RefSeq) PHD finger protein 19-like
KO
K11486
PHD finger protein 19
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121550429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121550429
03036 Chromosome and associated proteins [BR:
cclu03036
]
121550429
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
121550429
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
121550429
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mtf2_C
Tudor_2
PHD
PHD_2
Prok-RING_1
DUF4537
PHD_ash2p_like
C1_1
PHDvar_NSD
Chromo
DUF3408
Motif
Other DBs
NCBI-GeneID:
121550429
NCBI-ProteinID:
XP_041718614
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Position
18:complement(23386998..23408749)
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AA seq
567 aa
AA seq
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MLESAYRDDFCSVEPKKGLEAKRLPQKREREQSFTDLESSLTVGQYVLCRWSDGLYYLGK
IQRVSTSKQSCFVTFEDNSKFWVLWKDIQHAGVPGEEPKCSVCSEMVLVSDNEILICGKC
GIGYHQQCHLPEVESSMDLSPWFCRRCIFALAVRKGGALKKGPIAKALQAMKQVLTYNPE
ELEWDSQHRTNPQQCYCYCGGPGEWYLKMLQCFRCEQWFHEACIQCLQESMMFGDRFYLF
ICSVCNKGVEYIKRLALRWVDVVHLALYNLGVQNKKKYFELEEILNFVSNNWEHFHLGKL
SNTPPTERGQYLLDALNNYKSKFLCGKEIKKRKCIFRLRTRVPPNPPSKLFPERSQNDGW
RGRKKGADRNSSLPAEKRRKKRSKWLLEDAIPNNDLTSAWSTNHHMANIFDFTLDELQSL
KSTSSGQTFSLDLDSTDAASTSGSATTSVSYDFRKNVGSRKRKLPTSNYTVLATKKEVVE
SELSPMELSLPGEEAASAMLDNAIDSHTFDSISEDDSSLSHLKSSITSYFGAAGRLTCGE
KYQVLARRVTPEGKVQYLVEWEGTTPY
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgttggagtcagcctacagagatgacttctgcagtgtggagccgaagaaggggctggag
gccaagcgtttaccccagaagagggagagggagcagagtttcacagacctggagagcagc
ctgaccgtgggccagtatgtcctgtgtcgctggtctgatggcctatactacctggggaag
atccagagagtgagtacctccaagcagagctgctttgttacttttgaagataattcaaaa
ttctgggttctctggaaagacatccaacatgctggagttccgggggaggaacccaaatgc
tcggtttgttctgaaatggtgctggtgtccgacaatgagatcctgatatgtgggaaatgt
ggaataggttaccaccagcagtgccacctgccagaggtggagagctcaatggatttgtca
ccatggttttgcaggaggtgcatctttgctttagctgtgcggaaagggggagctctcaaa
aagggccctatagcaaaagcactgcaggccatgaagcaggtgcttacctacaacccagaa
gagctggagtgggattctcagcaccgcacaaatccccaacagtgttattgctactgtgga
ggacctggggagtggtacttgaagatgctgcagtgttttcggtgtgaacagtggttccat
gaggcctgtatccaatgcctacaggagtccatgatgtttggagataggttttacttgttc
atctgttccgtgtgtaataaaggagtggagtacattaagcgcctggccctccgatgggtg
gacgtggtgcacttggctctttacaacctgggagtccagaataagaagaagtactttgag
ctggaggaaatcctcaactttgtcagcaacaactgggagcatttccatttgggcaagctc
tccaatactcctccaacagaaagaggccaatatctccttgatgctctgaacaactacaag
agcaagtttctttgtgggaaggagatcaagaagaggaaatgcatcttccgcctgaggacc
cgcgttccccccaaccctccctccaaactctttcccgagaggtcccaaaacgatggatgg
agaggacgaaagaaaggcgcagacaggaacagctctctcccggcagagaaaaggaggaag
aaaaggtcaaaatggctgctggaggacgccattcccaataatgacctgacctcagcctgg
agcaccaaccatcacatggccaacatctttgacttcacattggacgagttacaaagcctc
aaaagtaccagctcaggacagaccttcagtctggacctggactccacagacgctgccagc
acctctggatccgccaccaccagtgtctcctacgacttcaggaagaatgttggcagtcgt
aagaggaagctgcccacctctaactacacggtgctggccactaaaaaggaggtggtggag
agcgagctgagccccatggagctgagcctaccaggagaggaggccgcctccgcgatgctg
gacaacgcgatcgacagccacaccttcgacagcatcagcgaggatgactcctccctctcc
cacctcaagtcgtccatcaccagctactttggggcggcagggcggctaacctgcggagag
aagtaccaggtgctggcccgccgggtcacgccggaggggaaggtgcagtatctggtggag
tgggagggcaccacgccctactga
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