Coregonus clupeaformis (lake whitefish): 121550445
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Entry
121550445 CDS
T08357
Symbol
hdac4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
121550445 (hdac4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121550445 (hdac4)
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
121550445 (hdac4)
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
121550445 (hdac4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
121550445
NCBI-ProteinID:
XP_041718644
LinkDB
All DBs
Position
4:7272871..7470938
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AA seq
1065 aa
AA seq
DB search
MLRTIFETDSPSSLSPADGLPRKEQPLELLKPSGLNHIQSVDVSAALPMQVPPAAIPMDL
RLDQPFGLAPRPGDQGHQGQVPGQREQQLQQELLALKHKQQIQRQLLIAEFQRQHEQLSR
QHEVQLQEHVKHQQDLLALKHQQELLEHQKKMERHRQEQEMEKQQREKKLLLLKNKERGQ
ESAVASTEVKMRLQEFVLNKKKALAQRSLNHCMNTDPRYWYGKTQHSSLDQSSPPQTGMS
PYNHAILGMYDPKDDFPLRKTASEPNLKLRSRLKQKVTERRSSPLLRRKDGPIITTAKKR
SLDMAESACNSAPGSGPSSPNNSSSNITNENGIASPVEASLAHRLASREGPLSQLSLYTS
PSLPNITLGLPATGPSSMTSGQQDGDRLSMHERLQQGIPITTPFIPGAHLPSYLTDGGSA
HNPLLHHMVLLEQSQNPLGLSCCLGGLPLQSPSIHKLRGQHRPLGRTQSAPLPQNAQALQ
QLVVQQQHQQFLEKHKQQFQQQQLHINKMMAKPSEPGPGRQHESHPEETEEELREHQALC
PQEGVLMCGVTVKQEPPDPQEEEWDNRERMVDQELLFRQQAVLLEQQRMIQLRNYQASME
SAGLSVTFPVHRPLSRAQSSPASACLPPIVVQQEPPTKPCFTTGLVYDTLMQKHQCMCGN
TNTHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHVLLYGTNPLRQK
LDSSLTPMFVRLPCGGVGVDSDTIWNEVHSSSAARLAVGSVVELVFKVAAGELKNGFAVV
RPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLSVNKILIVDWDVHHGNGTQQAFYSDPNI
LYLSLHRYDDGNFFPGSGAPDEVGTGAGMGFNVNMAFTGGLEPPMGDAEYLAAFRTVVMP
IANEFAPDVVLVSSGFDAVEGHASPLGGYRLTAKCFGYLTRQLMGLAGGRLVLALEGGHD
LTAICDASEACVSALLGIELDPIPEEVMQQRPNPNAVHSMEKVLEEHGKYWRSLQRGAST
LGYSLSEARQCETEEAETVTAMASLSVANKQRRSKEEPMEEEAPM
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggaccatatttgaaacggactctccttcctctctctcccctgcagatggactg
cccaggaaagagcagcccttggaacttctgaagccatctggcctcaaccacatccaatct
gtcgacgtgagcgcggcactgcccatgcaggtgcccccggccgccatccccatggacctg
cggctggaccagccctttggcctggcaccgcgaccaggcgaccagggccaccaaggacag
gtcccaggtcagcgggagcagcagctgcagcaggagctgctggccctcaaacacaaacag
cagatccagagacagctgctcatcgccgagttccagcggcaacacgagcagctctcacgc
cagcatgaggtccagctacaggagcatgttaagcaccagcaggacctcctggccctgaag
catcagcaggagctgctggagcaccagaagaagatggagagacaccgccaagagcaggag
atggagaagcagcagagggagaagaaactcctgctgctcaagaacaaggagcgtggccag
gagagtgcggtggccagcacggaggtcaagatgcggctgcaggagtttgtcctgaacaaa
aagaaagccctggctcagcgcagcctcaaccactgcatgaacactgacccacgctactgg
tacgggaagacccagcacagctccctggaccagagctcccctccccagacagggatgtcc
ccttacaaccacgccatcctgggcatgtacgaccccaaagacgactttcctctccgcaag
acagcctctgagcccaacttgaagctccggtccaggctaaaacagaaggtgacagagcgc
agaagtagcccactgctacgtaggaaggatggtccaataatcactactgccaagaagcgc
tctctggacatggctgaatcggcctgcaacagtgcacctggctcgggccccagttcgccc
aacaacagctccagtaacatcaccaatgagaatggcattgctagtccagtagaggcctcc
ctggcccacaggctggccagccgagagggccccttgagccagctgtctctgtacacatcg
ccctcactgcctaacatcaccctgggcctgccagccaccggcccgtccagcatgacgtca
ggccagcaggatggtgacaggctatcgatgcatgagaggctgcagcagggcatccccata
accactcccttcatcccgggggcccacctgccctcctacctgactgacgggggctcggca
cacaaccccctcctccaccacatggtcctcctggagcagtcccagaacccactaggtctg
tcctgctgcctgggcgggctgcccttgcagtcgccctccatccacaagctgcgtgggcag
caccgtcccctaggaaggacccagtcggcccctctgccccagaacgcccaggccctgcag
cagctggtagtccagcagcagcaccagcagttcctggagaaacacaagcagcagttccag
cagcagcaactgcacatcaacaagatgatggccaagcccagcgagccagggccgggtcga
cagcacgagagccacccggaggagacagaagaggagctaagggagcaccaagccctgtgt
ccccaggaaggagtcctcatgtgtggggtgacagtcaagcaggagcccccggacccccag
gaagaggagtgggacaacagagagaggatggtcgaccaggagctgctcttcagacagcag
gcagtgttattggagcagcagaggatgatccagttaaggaactaccaggcttctatggag
tcagccggcctgtcggtcaccttcccagtgcaccgtcccctctccagggcccaatcatct
cctgcctcggcctgcctcccccccattgtggtacagcaggaaccgcccaccaagccttgc
ttcaccactggcctggtgtatgacacgttgatgcagaagcaccagtgtatgtgtggcaac
accaacacacacccagagcacgccggacgcatccagagcatctggtcccgactacaggag
acgggactgaggggaaagtgtgagtgtatccgagggcggaaagccactctggaggagttg
cagacggttcactctgaggcccacgtccttctgtatggaaccaacccactccgacagaaa
ctagacagttcattgactcccatgttcgtgaggctgccttgtggaggggtgggggtggac
agcgacaccatttggaacgaggtccactcgtccagcgcagctcgtctggctgtgggctcc
gtcgtggagctggtcttcaaagtggcagctggagagctcaagaacggctttgctgtagtc
cggccccctggacaccacgcagaggagagcacacctatgggattctgttacttcaactca
gtggccatcgcagctaaacttctgcagcagaggctcagtgtcaataagatcctgattgtg
gattgggatgttcaccatggaaatggcacgcaacaggcattctacagcgaccccaacatt
ctctatctgtcactccatcgctacgacgacggcaacttcttccccggcagtggagcgcct
gatgaggtgggcactggggcaggcatgggcttcaatgtgaacatggctttcaccggggga
ctagaaccacccatgggagacgcagagtacctggctgccttcaggacggtggtgatgccc
atcgccaacgagtttgctcctgacgtggttctggtgtcttcaggattcgatgctgtggag
ggccacgcgtcacccctgggagggtacaggctaacagccaaatgttttggctacctgacc
aggcagctgatgggcctggccgggggccgcctggtactggccctggaggggggccatgac
ctcactgccatctgcgatgcctctgaagcctgtgtctctgctttgctaggaatcgagttg
gatcctatccctgaggaggtgatgcagcagaggcccaaccccaacgctgtccactccatg
gagaaggtgctggaggaacatggtaaatactggcgctctctgcagcgcggggcctccacg
ctgggatactctctgagcgaggctcgtcagtgtgagacggaggaggccgagaccgtcact
gccatggcctccctctctgtggccaacaagcagaggaggagcaaggaggagccaatggag
gaggaggcgcctatgtaa
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integrated database retrieval system
