Coregonus clupeaformis (lake whitefish): 121550463
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Entry
121550463 CDS
T08357
Symbol
rnf25
Name
(RefSeq) E3 ubiquitin-protein ligase RNF25 isoform X1
KO
K10640
E3 ubiquitin-protein ligase RNF25 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121550463 (rnf25)
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121550463 (rnf25)
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121550463 (rnf25)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RWD
zf-RING_11
zf-RING_2
zf-C3HC4_2
zf-RING_UBOX
VPS18_RING_C
zf-ANAPC11
zf-rbx1
zf-C3HC4
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
121550463
NCBI-ProteinID:
XP_045079242
LinkDB
All DBs
Position
10:63513131..63524010
Genome browser
AA seq
502 aa
AA seq
DB search
MAAENEGWEVSLVLYPSTGEDSLSQFVRLTLTLTLDLQYPSSPPSISIHNPRGLSDDKLC
SVQKCLQTEAESCLGSPVLYQLIEKAKEILTESNIPHGNCVICLYGFKDGEAFTKTRCYH
YFHSHCLGRYITHSETELQEREKELEQDKTRERTDDEELTVVCPVCREPLTYNVDQLLSN
PAPSFPKLEGAVIGVAFRQKWAELQNLLERQKAKGGIIDTEAESNRFLIHINEPPPNSDI
SADGDASLSQSLPSLPPASTNQITAPQLQHAGHSHRRGGPGHQCHHQGPQGHFRGPRRRG
RGRPHTHPGRPVPPTDHLDKLSLSSEKHDNFHSAPPANSHDAPNKARLQENSSHPELGQA
QLSQLEKEEGEGRTELGQQEAPVPKDGQPIRKSSLDTSKTDIPPSNDMEMEAGLGHRERG
RRRGPRGSAQQPDQRQERHFRGTDQWDARGGGYHRYWNGRGQRSRGGVNYPRSREGGAHM
AGGRGFHQRVGEGEVGREGAAL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgaaaacgagggatgggaggtgagcctggttctatacccctccacgggtgaa
gattccctctctcagtttgtgcgactcaccctaactttgactctcgacttgcagtatccc
tcctctcctccctccatttccatccacaaccctcggggtctttctgatgacaagctgtgc
agtgtgcagaaatgtctgcagacagaggcggagtcctgcctgggttcccctgtgttgtac
cagctcattgagaaagccaaagagatcctgacggagagtaatattccacatgggaactgc
gtcatctgcctttacggattcaaggatggggaggcgttcaccaagaccagatgctaccac
tacttccactcccactgcctaggccgctacatcacccactctgagactgaactccaggag
agggagaaggagctggagcaggacaagacacgggagaggaccgacgatgaggagctaacg
gttgtgtgtcccgtgtgtagagaacctctgacttacaacgttgaccagctcctgtctaat
cccgcccctagctttccaaagctggagggagcggtgataggggtggcgttccggcagaag
tgggctgagctccagaaccttttggagcgtcagaaagcaaaaggtgggattatcgacaca
gaggcggagtctaaccgcttcctcatacacattaatgagccgcctcccaactcagacatc
agcgctgacggggatgcctctctcagccaatcactgccctcccttccccctgcctccacc
aatcagatcacagcaccacagctgcagcacgctggccactcgcatcgcaggggagggcca
ggtcaccagtgccatcaccaggggccgcagggccacttcaggggccccaggaggagaggg
agaggcaggccccacacccacccagggagacctgtcccccccactgaccatctggacaaa
ctctctctgtcctcagagaaacatgacaacttccacagtgctcctcctgccaactctcat
gacgcaccaaacaaagccagacttcaggagaactctagccacccagaactgggacaagca
cagttaagccaattggagaaggaagaaggggagggacgtacagagctaggccaacaagag
gctccagttcctaaagacggtcagccaataaggaaatcaagcctggacacctctaaaacg
gacatcccacctagcaatgacatggaaatggaggctgggctaggccatagggagagggga
aggaggaggggccctcgcggttcagcgcaacagcctgaccaaaggcaggagaggcatttc
agaggaacggaccaatgggatgctcgggggggcgggtaccatcgctactggaacgggcga
ggtcagcgaagcaggggaggtgtcaactacccccgtagcagagaaggtggggctcacatg
gctggtgggaggggcttccatcagagagtgggagagggagaggtggggagagagggtgct
gctctatga
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integrated database retrieval system
