Coregonus clupeaformis (lake whitefish): 121550473
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Entry
121550473 CDS
T08357
Name
(RefSeq) nuclear receptor subfamily 6 group A member 1-A-like isoform X1
KO
K08561
germ cell nuclear factor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121550473
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cclu03310
]
121550473
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 germ cell nuclear factor
121550473
Nuclear receptors [BR:
cclu03310
]
6. Germ cell nuclear factor
6A. Germ cell nuclear factor receptor
121550473
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121550473
NCBI-ProteinID:
XP_041718673
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Position
18:16771502..16799614
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AA seq
461 aa
AA seq
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MKEENPVDDVAADPRVCLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCE
MSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQITDDEIERIMSGQEFK
EEASLPEHSWSNNGDSSDHSSPSNGASEGNQPSPASTLSSNRSVEMNGGYTAALRDQYIN
TPMNTPYQLLPHLFSYHAQSGLLAPQPRSLYPQSHPLVLQLVAAEDLAPLATPMLIEDGY
KVTQVELFALLCRLADELLFRQISWIKKLPFFCELSIEDYTCLLSSTWQELILLSCLTIY
SAQIFGDLADVTAKYTPSDDELQGFSENGMEVMERLIYLFRKFHQLKVSNEEYACMKAIN
FLNQDIRGLTNISQLEQLNKRYWYVCQDYTEYKYPHQPKRFPEIMMCLPEIRFMAGKLVN
VPLEQLPLLFKAVLHSCKSSLISYRTGSSPCLTSTGTSPGN
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggaaaacccagtggatgatgttgcagcagacccgcgtgtttgccttatctgt
ggagaccgcgctacaggcctgcactatggcatcatctcctgcgagggctgcaagggcttc
ttcaagcgcagcatctgcaacaagcgagtgtaccgctgcagccgtgacaagaactgcgag
atgtcgcgcaagcagcgcaaccgctgtcaatactgccgcctgctcaagtgtctacagatg
ggaatgaaccgcaaagcaatcagggaagatgggatgccaggagggagaaacaaaagcatt
ggacctgtccagatcacagatgacgagattgagcggatcatgtcgggacaggagtttaag
gaggaagccagtctcccggagcacagctggagcaacaacggtgacagtagtgaccacagt
tcccctagcaatggcgcctccgagggcaaccagccatcacccgcatccactctgtcatcc
aatcgctctgtagagatgaatggtggctacacggctgctctcagggaccagtacatcaac
acccccatgaacaccccctaccagctgctacctcacctcttcagctaccatgcccagtca
ggcctgctggccccccagccccgcagcctctacccccagtcacaccccctggtgctgcag
ctagttgctgcagaggacctggctccactggccacccccatgctgatagaggacgggtac
aaggtgactcaggtggagttgtttgcactgctgtgtcgtctggccgacgagctgctgttc
cgtcaaatctcgtggatcaagaagctgccgttcttctgtgagttgtccatcgaggactac
acctgtctgctcagctccacctggcaggaactcatcctgctctcctgcctcaccatctac
agtgcgcagatctttggagacctggctgacgtcaccgccaagtacacgccctctgatgac
gagctgcaagggttcagtgagaatggcatggaggtgatggagaggttgatctatctgttc
cgcaagttccaccagttgaaggtcagcaacgaggagtacgcctgcatgaaagccataaac
ttcctgaaccaagatatccgtggtctgactaacatctcccagttggagcagctgaacaag
cgttactggtacgtgtgtcaggactacactgagtacaagtaccctcaccagcccaaacgc
ttccctgagatcatgatgtgtctgccagagatccgcttcatggcaggcaagctggtgaat
gttcccctggaacagctccccctcttgttcaaagcagtcttgcactcctgcaaatccagc
ctaatcagctacaggacaggaagttccccctgtctgacttctacgggtacctcccctggg
aactga
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