Coregonus clupeaformis (lake whitefish): 121550477
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Entry
121550477 CDS
T08357
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic-like
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121550477
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cclu01007
]
121550477
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cclu03016
]
121550477
03029 Mitochondrial biogenesis [BR:
cclu03029
]
121550477
Enzymes [BR:
cclu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
121550477
Amino acid related enzymes [BR:
cclu01007
]
Aminoacyl-tRNA synthetase
Class I (G)
121550477
Transfer RNA biogenesis [BR:
cclu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
121550477
Prokaryotic type
Other AARSs
121550477
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
121550477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
tRNA-synt_1e
ADIP
DUF29
tRNA-synt_1
tRNA-synt_1g
Cnn_1N
Motif
Other DBs
NCBI-GeneID:
121550477
NCBI-ProteinID:
XP_041718679
LinkDB
All DBs
Position
35:complement(4152428..4169129)
Genome browser
AA seq
660 aa
AA seq
DB search
MGDPVSEYTSRLQQQELEIHSLTAEIESLKNPQNLGLSSHLDGLKEENVKLKYRLNVLKR
SLQEERSQCSKTMMNINQRLQEIFGEAIREACPDLENPPLTVTPNQQAKFGDYQCNSAMA
MAQMMKSKGLKVNPREIAEKILQNIPDNELIEKTEIAGPGFINVQLKRSFVSKLLTNLLL
NGVRPPPLASKKKVVVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFLGYNVLRLNHVGD
WGTQFGMLIAHLQDKFPNYLTVSPPIGDLQAFYKESKKRFDEEEDFKKRAYQCVVKLQSK
DPAFIKGWNLICDVSRNEFQKIYNCLDIQIIERGESFYQEKMTAVVKEFEAKGLVEMDEG
RKIVFAPGQQIPLTVVKSDGGYTYDTSDLAALRHRIFDEKADIIIYVTDSGQGTHFQLVF
AAAQMIGWYDPNVTRVEHAGFGVVLGEDKKKFKTRSGDTVRLMDLLDEGLKRSMDKLKEK
DRDKVLSTEDLTKAQRSVAFGCIKYADLSHNRINDYVFSFDKMLDDRGNTAAYLLYAFTR
IRSIARLANIDEAALRKAAETTEVLLEHDKEWKLGKCLLRFPEILQKILDDLLLHTLCDY
LYELATTFTEFYDSCYCIEKDRQTGEVVKVNMWRMLLCDATAAIMAKGFDILGINPISRM
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgggagatcctgtgtctgaatacacgtcccgacttcaacagcaggagctggagatccat
tccctcactgcagagatcgagagcctgaagaacccacagaacctgggcttgtcctcacac
ctggatgggctgaaagaggagaacgtgaagctcaaataccgcctcaatgtcctcaaaagg
agtctgcaagaggagagaagccagtgcagtaagaccatgatgaacatcaaccagcgtctg
caggagatctttggggaggccatccgggaggcctgccccgacctggagaaccctcccctg
accgtcacccccaaccagcaggcaaagtttggggactaccagtgtaacagcgctatggcc
atggcccagatgatgaaatcaaagggcctgaaagttaaccctagggagatcgctgagaag
attctgcagaacattcctgacaatgagctcattgagaagacagaaattgctggaccaggg
ttcatcaatgttcagcttaagagatcatttgtgtccaaactgctgaccaacctgctactc
aacggtgtccgacctcctcccttagcgagcaagaagaaggtggttgtggacttctcatct
ccaaacatcgccaaggagatgcacgtaggtcacctgcgctccacaatcatcggggacagc
atgtgtcgtctctttgagttcctgggctacaacgtcttgaggctgaatcacgtaggggac
tggggcacacagtttgggatgctcatcgctcacctgcaagacaagttcccaaactaccta
accgtgtcccctcctatcggagacctgcaggccttctacaaagagtctaagaagcgtttt
gatgaggaggaggactttaagaagagggcctaccagtgtgtggtcaagctgcagagcaaa
gacccagccttcatcaaaggatggaacctcatctgtgacgtttccaggaatgaattccag
aagatctacaactgtctggacattcagatcatcgagagaggagagtccttctaccaggag
aagatgaccgccgtggtcaaagagtttgaggccaaaggcctggtggagatggacgagggt
cgtaagatagtgtttgccccgggccagcagatccccctgacagtggtgaagtctgacggt
ggctacacctacgacacatcagacctggccgccctgcgccaccgtatctttgacgagaag
gcagacatcatcatttacgtgacggacagcggccagggcacccacttccagctagtgttt
gcagcggctcagatgattggctggtacgaccccaatgtgacacgagtggagcacgctggt
ttcggagtggtgctgggagaggacaaaaagaagtttaagactcgctccggggacacggtg
aggctgatggacctgctggacgaaggcctgaagaggtccatggacaaactcaaggagaag
gacagggacaaggtgctgagcacggaggatctgaccaaggcccagcgctcggtggcgttc
ggctgcatcaagtacgccgacctatcgcacaaccgcataaacgactacgtgttctccttc
gacaagatgctggacgaccggggcaacacggccgcctacctcctctacgccttcacccgc
atcaggtccatagcccggctggctaacatcgacgaggcagcgctccgtaaagcagcagag
accacggaggtgctcctggagcacgacaaggagtggaagctgggcaagtgtctcttgcgc
ttccctgagatcctccagaagatcctggatgacctgctgctccacacgctgtgtgactac
ctgtatgagctggccacaaccttcacagagttctacgacagctgctactgtattgagaaa
gaccgccagacaggtgaggtggtaaaagtaaacatgtggaggatgctcctgtgtgacgcc
actgctgccatcatggccaaaggctttgacatcctgggcatcaaccccatctccaggatg
tga
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