Coregonus clupeaformis (lake whitefish): 121550500
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Entry
121550500 CDS
T08357
Name
(RefSeq) actin-related protein 3
KO
K18584
actin-related protein 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
cclu04530
Tight junction
cclu04810
Regulation of actin cytoskeleton
cclu05100
Bacterial invasion of epithelial cells
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121550500
09144 Cellular community - eukaryotes
04530 Tight junction
121550500
09142 Cell motility
04810 Regulation of actin cytoskeleton
121550500
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121550500
05100 Bacterial invasion of epithelial cells
121550500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121550500
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121550500
04147 Exosome [BR:
cclu04147
]
121550500
Membrane trafficking [BR:
cclu04131
]
Others
Actin-binding proteins
Arp2/3 complex
121550500
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
121550500
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121550500
Exosomal proteins of other body fluids (saliva and urine)
121550500
Exosomal proteins of bladder cancer cells
121550500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
MreB_Mbl
FtsA
Robl_LC7
Motif
Other DBs
NCBI-GeneID:
121550500
NCBI-ProteinID:
XP_041718716
LinkDB
All DBs
Position
4:6102645..6123738
Genome browser
AA seq
414 aa
AA seq
DB search
MAGRLPACVVDCGTGYTKLGYAGNTEPQFIVPSCIAIKESAKVGSRTVKGVDDLDFFIGD
EGIDKPNYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENRE
YTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGY
VIGSCIKHIPIAGRDITYFTQQLLREREVGIPPEQSLETAKAVKERFSYVCPDLVKEFNK
YDTDGSKWIKQYTGINNISKKEFTVDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVI
QNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKMSEELSGGKLKPKPID
VQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVMS
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggcaggacgattaccggcgtgtgttgtcgactgcggtacaggatacactaagctgggg
tatgcagggaacacagagccacagttcattgttccatcatgtattgcaatcaaagagtcg
gccaaggttggatcaaggacggtcaagggggtggacgacctggacttcttcatcggagac
gaggggatagacaagcccaattatgccacaaagtggcccatccgtcacggcattgtggag
gactgggacctgatggagaggttcatggagcaggtgatcttcaagtacctgagggcggag
cctgaggaccactacttcctgttgacagagcctcctctgaatacaccagagaaccgagag
tacacagcagagatcatgtttgagtccttcaacgtcccagggctctacattgcagtgcag
gctgtcctggcgctggcggcctcctggacatccagacaggtgggggagaggacactgacg
gggacggtcatcgacagcggagatggagtcacccatgttatccctgtggctgagggctac
gtcatcggcagctgtataaagcacatccccatcgcgggtcgtgacatcacctacttcacc
cagcagcttctgagggagcgggaggtgggcatccccccagagcagtccctggagacggcc
aaggcagtcaaggagcgtttcagctacgtgtgtcctgacctagtgaaagagttcaacaag
tacgacacggacggctccaagtggatcaagcagtacaccggaattaacaacatcagcaag
aaggagttcaccgtcgatgtgggctacgagcgcttccttggccctgagatcttcttccat
ccagagtttgccaatcctgacttcacccagcccatctccgaagttgtggacgaggttatc
cagaactgccccattgacgtcagacgtcctctttacaagaacattgtcctgtcaggaggt
tccaccatgttcagggactttgggcggcgcctgcagagggacctgaagaggactgtggac
gccaggctgaagatgagtgaggagctgagtgggggcaagctcaagcccaaaccaattgat
gtgcaagtcatcactcatcatatgcagagatatgcagtgtggttcggaggatccatgtta
gcctcaactcctgagttctaccaggtatgccacaccaaaaaggactatgaggagatcggg
cccagcatctgtcgtcacaaccccgtgttcggagtcatgtcttaa
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