KEGG   Coregonus clupeaformis (lake whitefish): 121550500
Entry
121550500         CDS       T08357                                 
Name
(RefSeq) actin-related protein 3
  KO
K18584  actin-related protein 3
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144  Endocytosis
cclu04517  IgSF CAM signaling
cclu04519  Cadherin signaling
cclu04530  Tight junction
cclu04810  Regulation of actin cytoskeleton
cclu05100  Bacterial invasion of epithelial cells
cclu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    121550500
   04519 Cadherin signaling
    121550500
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    121550500
  09144 Cellular community - eukaryotes
   04530 Tight junction
    121550500
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    121550500
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    121550500
   05100 Bacterial invasion of epithelial cells
    121550500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cclu04131]
    121550500
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cclu04812]
    121550500
   04147 Exosome [BR:cclu04147]
    121550500
Membrane trafficking [BR:cclu04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    121550500
Cytoskeleton proteins [BR:cclu04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     121550500
Exosome [BR:cclu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121550500
  Exosomal proteins of other body fluids (saliva and urine)
   121550500
  Exosomal proteins of bladder cancer cells
   121550500
SSDB
Motif
Pfam: Actin MreB_Mbl FtsA Robl_LC7
Other DBs
NCBI-GeneID: 121550500
NCBI-ProteinID: XP_041718716
LinkDB
Position
4:6102645..6123738
AA seq 414 aa
MAGRLPACVVDCGTGYTKLGYAGNTEPQFIVPSCIAIKESAKVGSRTVKGVDDLDFFIGD
EGIDKPNYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENRE
YTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGY
VIGSCIKHIPIAGRDITYFTQQLLREREVGIPPEQSLETAKAVKERFSYVCPDLVKEFNK
YDTDGSKWIKQYTGINNISKKEFTVDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVI
QNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKMSEELSGGKLKPKPID
VQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVMS
NT seq 1245 nt   +upstreamnt  +downstreamnt
atggcaggacgattaccggcgtgtgttgtcgactgcggtacaggatacactaagctgggg
tatgcagggaacacagagccacagttcattgttccatcatgtattgcaatcaaagagtcg
gccaaggttggatcaaggacggtcaagggggtggacgacctggacttcttcatcggagac
gaggggatagacaagcccaattatgccacaaagtggcccatccgtcacggcattgtggag
gactgggacctgatggagaggttcatggagcaggtgatcttcaagtacctgagggcggag
cctgaggaccactacttcctgttgacagagcctcctctgaatacaccagagaaccgagag
tacacagcagagatcatgtttgagtccttcaacgtcccagggctctacattgcagtgcag
gctgtcctggcgctggcggcctcctggacatccagacaggtgggggagaggacactgacg
gggacggtcatcgacagcggagatggagtcacccatgttatccctgtggctgagggctac
gtcatcggcagctgtataaagcacatccccatcgcgggtcgtgacatcacctacttcacc
cagcagcttctgagggagcgggaggtgggcatccccccagagcagtccctggagacggcc
aaggcagtcaaggagcgtttcagctacgtgtgtcctgacctagtgaaagagttcaacaag
tacgacacggacggctccaagtggatcaagcagtacaccggaattaacaacatcagcaag
aaggagttcaccgtcgatgtgggctacgagcgcttccttggccctgagatcttcttccat
ccagagtttgccaatcctgacttcacccagcccatctccgaagttgtggacgaggttatc
cagaactgccccattgacgtcagacgtcctctttacaagaacattgtcctgtcaggaggt
tccaccatgttcagggactttgggcggcgcctgcagagggacctgaagaggactgtggac
gccaggctgaagatgagtgaggagctgagtgggggcaagctcaagcccaaaccaattgat
gtgcaagtcatcactcatcatatgcagagatatgcagtgtggttcggaggatccatgtta
gcctcaactcctgagttctaccaggtatgccacaccaaaaaggactatgaggagatcggg
cccagcatctgtcgtcacaaccccgtgttcggagtcatgtcttaa

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