Coregonus clupeaformis (lake whitefish): 121550592
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Entry
121550592 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase HECW2 isoform X1
KO
K12168
E3 ubiquitin-protein ligase HECW2 [EC:
2.3.2.26
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121550592
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
121550592
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
HECT type E3
121550592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
HECW_N
HECW1_helix
WW
C2
RFXA_RFXANK_bdg
Motif
Other DBs
NCBI-GeneID:
121550592
NCBI-ProteinID:
XP_041718854
LinkDB
All DBs
Position
4:5484706..5552212
Genome browser
AA seq
1530 aa
AA seq
DB search
MRPSLATAVLPRTRNHPHTAHPHNAHGLSGHVGREHLSAPRRRSPHLRHTLSPENLRSLA
ERGGAAGYTASVVSSPMGLPRANSDTDLVTSQSRSSLTASTLEFTLGRGENLVISWDIKE
EVDATDWIGLYHIDETSPSNVWDCKNRGVNGTQRGQIVWRLEPGPYFMDAETKICFKYYH
GVSGALRATTPCITVKNPGVLGEGQSEGKSSTDHPRKLISFTLTDMRAVGLKKGMFFNPD
PYLKMSIHPGKRSGFPTFSHHGQERRSAIITNTTNPKWHREKYTFVALMTDILNIEVKDK
FAKSRPIIKRFLGQLTIPVQRLIEKIPGVQPLSFSLCRRLPTEHVSGQMQFKVELTSTGP
DGASPDSIIGVPNNGAPGTPSDDEDLPHPLPGVVTGGPSPTGSLGSQRSWEGGATAYPVP
DYRDFSGTEGGTTEGESYSGPQRLQRSLSEGLDAIEAPKGPGERPLGAASPKLRSSFPTH
TRLSAMLHIDSDEEEERSGSTDIYPVPGSPLLLNGGHEEEDLFPELQQDSYIEQPQPRVE
GDEQEGVMGEDCASGGESYVAPELDLALDLEDASEPDVFSEVEDVPFFSEALSQSLLAEG
LEGPEEGQGPADDPSSEIDTCSMATAPQTVFSSSDSCPITMSTAQEAEERAEAAIDPGGD
TITGNPPTSQHVDEEGGGQMPANEVEGDDPPVNELEPGEEISELRRSLQASGGVSQDEVG
EEPRAAGDAGSVDSDVVATETDGEDGAQVNGHPVHSLPTVRHDIHRYQRVDEPLPPNWEA
RIDSHGRIFFVDHVNRTTTWQRPTGPPAPQGLTRSNSIQQMEQLNRRYQSIRRTMTSERS
EENTVDLPPEPTESDLLPQTIPEYRRESAVGHSSSRSRLSLLLQSPSAKFLCSPDFFTVL
HSNPSAYRMFTSNTCLKHMISKVRRDAHHYERYQHNRDLVAFLNMFTNKQLELPRGWEMK
HDQSGKPFFVDHNCRSTTFIDPRLPLQSARSTGLLAHRQHLSRQRSHSAGEVVDNTRHSS
PPVMPRPSSTFSGSTRNQYQDLVPVAYNDKIVAFLRQPNIIEILQERQPELVRNHSLKER
LQFIRSEGVSGLARLSSDADLVILLSLFEEEVMSYVPPAALLHPSYCSSPQSSPGTQRAN
ARAPAPYKRDFEAKLRNFYRKLETKGYGQGPGKVKLIVRRDHLLEDAFNQIMCYSRKDLQ
RSKLYVSFVGEEGLDYSGPSREFFFLVSRELFNPYYGLFEYSANDTYTVQISPMSAFVDN
HHEWFRFSGRILGLALIHQYLLDAFFTRPFYKGLLRIPCDLSDLEFLDEEFHQSLQWMKD
NDIEDMLDLTFTVNEEVFGQITERELKPGGAGIPVSEKNKKEYIERMVKWRIERGVAQQT
ESLVRGFYEVVDVRLVSVFDARELELVIAGTAEIDLADWRNNTEYRGGYHDNHIVIRWFW
AAVERFNNEQRLRLLQFVTGTSSIPYEGFASLRGSNGPRRFCVEKWGKITSLPRAHTCFN
RLDLPPYPSFSMLYEKMLTAVEETSTFGLE
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccctcacttgccacagcagtccttccaaggacccgtaaccatccccacacagcc
cacccccacaatgcacacggattgtccggacatgtggggcgggagcacctgtctgcgccg
cggaggcgcagcccgcacctgcgacacacgctcagcccggagaacctgcggagcctggca
gagcgtggcggcgctgccgggtacacggcttccgtggtgagcagccccatgggcctcccg
agggccaacagtgacacagacttggtgacgtcgcagagccgctcgtcgctgacggcgtcc
acgctggagttcacgctggggaggggcgagaacctggtcatctcctgggacatcaaggag
gaggtggatgccaccgactggatcggcctctaccacatcgatgagaccagcccgtctaat
gtgtgggactgtaagaatcgtggggtgaatgggacacagaggggccagatcgtctggagg
ctggagcctgggccttacttcatggacgctgagaccaagatctgcttcaagtactaccat
ggtgtcagtggagccctgagagcaaccaccccctgcatcactgtgaagaaccctggagtc
ctgggagaaggtcaaagtgaggggaagtcatccacagatcatcctcgcaaactaatcagc
tttactttaacagatatgcgtgcggtggggctgaagaagggaatgttcttcaacccggat
ccctacttgaagatgtccatccaccctgggaagaggagcggcttccccaccttcagccac
cacggacaggagagacgctccgccatcatcaccaacaccaccaaccctaagtggcacaga
gagaaatacacttttgtagcactgatgacagacattctgaacatcgaggtcaaggacaag
tttgccaaaagtcgaccaatcatcaagcgcttccttggtcagctgaccattcctgttcag
aggctgattgagaagatacctggtgtccagcctctgagcttctctctgtgtcgacggttg
cccactgagcatgtgagtggccaaatgcagttcaaagtggagctcacatccactggacct
gacggggcctcaccagactctatcattggtgtgcccaataacggggccccggggactccg
tcagatgacgaggatctgccccacccactcccgggggtggtcactggaggcccctcccct
actggctctctgggctcacagaggtcctgggaaggcggggccacagcctatccagtccca
gactacagggacttcagtggtacagagggcggaaccacagagggcgaatcctactctggc
cctcaacggctgcagaggtccctaagtgaaggcctggatgccatcgaggcccccaagggc
cccggagagaggcccctgggcgctgcctccccgaagctgcggtctagctttcccactcac
acacgcctcagtgccatgctgcacattgactcggacgaagaagaggagcgctcggggtcc
accgacatctacccggtgcccgggtcccccctgctgctcaacggggggcatgaagaagaa
gatctcttcccagagctacagcaggactcttacattgagcagccgcagcccagggtggag
ggtgatgaacaggagggggtaatgggggaagactgtgcctctggtggtgaatcttatgtg
gcacctgagttagacctggccctcgacttggaagacgcctcagagcctgatgttttctca
gaggtggaggacgttcctttcttctcagaggcactgtcccagagtcttttggctgagggc
ctggaggggccagaggagggccaggggcccgctgacgacccctcgtcggagattgacaca
tgctccatggcaacagccccacagacagtcttctcttcctcagacagttgcccaatcaca
atgtccacagctcaggaggcggaggaaagggcagaagctgccattgacccagggggagat
accatcaccggcaacccacccaccagtcaacatgtagacgaagagggaggcgggcagatg
ccagccaatgaggttgaaggagatgatccgccagtcaatgagctggagccaggagaggag
ataagtgagcttaggcggagcttgcaggcatctgggggtgtgtcccaggatgaggtgggg
gaggagccaagggcagcgggggatgcaggatctgtggattcagatgtagttgccacggag
acagatggagaggacggtgctcaagtgaacggtcaccccgtgcactcgctccccacagtg
cgccatgacatccaccgataccaacgagtggacgaacccttacctcctaattgggaggcg
aggatcgatagtcacggtcgtattttctttgtggatcatgtgaatcggaccaccacgtgg
cagcgccccaccggaccccccgccccccagggcctgacccgctccaactccattcaacag
atggagcagctcaaccgcaggtatcagagcataaggaggacgatgaccagtgagaggtcc
gaggagaacacagttgacctcccgccagagcccacagagagtgaccttctgccccagacc
atccctgagtacaggagagagagtgcggtgggtcactccagctcccggtctcgtctctct
ctgctgctccagtcccccagcgcaaagttcctgtgcagcccagacttcttcaccgtgctg
cattctaaccccagtgcctaccgcatgtttacgagcaacacttgcctgaagcacatgatc
agtaaggtgcgtcgggacgcccaccactatgagcgctaccagcacaacagggacctggtg
gcctttctcaacatgttcaccaacaaacagctggagctacccaggggctgggagatgaag
cacgaccagtccggcaagcccttctttgtggatcacaactgtcgctccacaaccttcatc
gacccgcggctccccctccagagtgcacgctccactggcctgctggcccaccgccagcac
ctcagccgccaacgcagccacagcgcaggcgaggtggtagataacacacgacactccagc
ccacctgtcatgccccgcccctccagcaccttcagtgggtccactcgcaatcaataccag
gacctggtgcctgtggcctacaatgacaagattgtggcgtttctacggcaacccaacatc
attgagatcctgcaggagaggcaaccagagcttgtcaggaaccactcactcaaggaaagg
ttacagttcattcgcagcgagggcgtttctgggcttgctcgtctctctagcgatgctgat
ctagtaattttgctcagcctgtttgaagaggaggtgatgtcctatgtgccacctgctgcc
ttactgcaccccagctactgctcctcccctcaaagctcccctggtactcagagagctaat
gcacgtgcccctgccccgtacaaacgtgactttgaggccaaactgagaaacttctatcgc
aagctggagacgaagggctatggccagggacctgggaaagtcaaattaatcgttcgtaga
gatcacctattggaggatgccttcaatcagatcatgtgctactcccgcaaagacctgcag
aggagtaagctctatgtcagctttgtgggcgaggaagggctggactacagcggcccttcg
agggagttcttcttcttggtgtcaagggagttgtttaacccttactacggcctgtttgag
tactcggccaatgacacctacactgtgcagatcagccccatgtctgccttcgtcgacaac
catcacgagtggtttcgtttcagtgggcgtatcctgggccttgctctgatccaccagtat
ctgttggatgccttctttacccgcccgttctacaagggcctgctgcggatcccgtgtgac
ctgagtgacctggagttcctggacgaggagttccaccaaagtttacagtggatgaaggac
aacgacatcgaggacatgctggacctcaccttcaccgtcaacgaggaggtcttcggacag
atcacagagagagagctgaagccaggcggggcaggtattccagtgtcagagaagaataag
aaggagtacatagagcgcatggttaagtggcgcatcgaaaggggcgtggctcagcagact
gagagcctggtgcgaggcttctatgaggtggtggacgtgcggctggtgtctgtgtttgat
gcccgggagctggagctggtgatcgctggcactgcagagatcgacctggcagactggagg
aacaacacagagtacagaggaggttaccatgacaaccacatagtaatccgctggttctgg
gcagcagtggagaggttcaacaatgagcagagactcagactgctgcagtttgtgacaggc
acctccagtattccctatgagggctttgcctccctcagaggtagcaatggaccacgcagg
ttctgtgtggagaagtggggcaaaatcacctccttacccagggctcacacatgctttaac
cgtctggacctcccaccgtacccttcgttctccatgctctacgagaagatgctgacggcc
gtggaggaaaccagcacctttggcctggagtaa
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integrated database retrieval system
