Coregonus clupeaformis (lake whitefish): 121550643
Help
Entry
121550643 CDS
T08357
Name
(RefSeq) interferon beta-like
KO
K05414
interferon alpha
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060
Cytokine-cytokine receptor interaction
cclu04217
Necroptosis
cclu04620
Toll-like receptor signaling pathway
cclu04621
NOD-like receptor signaling pathway
cclu04622
RIG-I-like receptor signaling pathway
cclu04623
Cytosolic DNA-sensing pathway
cclu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121550643
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
121550643
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
121550643
04621 NOD-like receptor signaling pathway
121550643
04622 RIG-I-like receptor signaling pathway
121550643
04623 Cytosolic DNA-sensing pathway
121550643
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121550643
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
121550643
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Interferons
121550643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
CoV_NSP2_N
Motif
Other DBs
NCBI-GeneID:
121550643
NCBI-ProteinID:
XP_045066565
LinkDB
All DBs
Position
35:10762025..10762987
Genome browser
AA seq
177 aa
AA seq
DB search
MSTFLCLAQVCSMPCQLKEQLVRTTHNLLRDMGGNFPLECLQDNVFMAFPATAFATSGAP
QLSSSGVKSIYETLKNIDSLFGVDDLPTMWDQQKLEYFQNIIYRQIEESKCMMGSVDTRD
YLVWAKVLKTYFGNIAEVLKEKNFSYCAWEVVRKELLYTLQFILEHNSDSLLWSNRT
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccttcctctgcctcgcgcaagtttgctccatgccttgtcagttaaaagaacag
ctggtgcgaacaacccacaacctactgagagacatgggaggtaattttcctctggagtgc
ctgcaggataatgtcttcatggcattcccagccactgctttcgcaacctccggcgcgcca
cagttgagcagcagcggtgttaagtctatttatgagacattgaagaacatcgactcattg
tttggagttgacgacctgccaacaatgtgggaccaacagaagttggagtattttcagaat
attatctaccgtcagattgaagagagcaaatgtatgatggggagtgtggatacacgtgat
tatctagtatgggcaaaggtgctgaagacatacttcgggaacatcgcagaagtcctaaaa
gaaaaaaatttcagttactgcgcctgggaagtggttcgaaaagagctcctgtacacccta
cagttcattctggaacacaactctgatagccttttgtggtccaacagaacatga
DBGET
integrated database retrieval system