KEGG   Coregonus clupeaformis (lake whitefish): 121550649
Entry
121550649         CDS       T08357                                 
Name
(RefSeq) interferon alpha-B-like
  KO
K05414  interferon alpha
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060  Cytokine-cytokine receptor interaction
cclu04217  Necroptosis
cclu04620  Toll-like receptor signaling pathway
cclu04621  NOD-like receptor signaling pathway
cclu04622  RIG-I-like receptor signaling pathway
cclu04623  Cytosolic DNA-sensing pathway
cclu05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    121550649
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    121550649
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    121550649
   04621 NOD-like receptor signaling pathway
    121550649
   04622 RIG-I-like receptor signaling pathway
    121550649
   04623 Cytosolic DNA-sensing pathway
    121550649
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    121550649
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:cclu04052]
    121550649
Cytokines and neuropeptides [BR:cclu04052]
 Cytokines
  Interferons
   121550649
SSDB
Motif
Pfam: Interferon SAP18
Other DBs
NCBI-GeneID: 121550649
NCBI-ProteinID: XP_041718928
LinkDB
Position
35:14273278..14274532
AA seq 184 aa
MATLNVSFVVHLLCIIVLKPVVYAKCSDRKYQIYYLSQTRQTLNDLAMERRPRGCIKEAE
MIMVQRPTLSIEEGEKLWTLRLAFQLASELFQQNLTLVKWNTIKLRELQHLLARQNRTYS
ECVRDMRLRQNLPIADMVKNYFKQLDDFLSHERFSLCSWEVVRAEIGSILRDFYIKTKMP
RKHV
NT seq 555 nt   +upstreamnt  +downstreamnt
atggcaactcttaacgtgtcctttgtggtgcatcttctgtgtataattgttcttaagccg
gttgtgtatgctaaatgcagtgatcgaaaatatcaaatatattatctttctcaaactcgc
cagaccctcaatgatcttgccatggagaggagaccaagaggctgtatcaaagaggcggaa
atgataatggtccaacgtccaacgctttcaatagaggaaggggaaaagctatggacactg
agacttgcgtttcaactagccagcgagctcttccaacaaaacctaacacttgtgaaatgg
aataccatcaaactcagggagctccaacaccttcttgctcgacaaaataggacctattcg
gaatgtgtcagagacatgcgtctgcgtcaaaaccttccaattgcagatatggttaagaac
tacttcaaacagctggacgactttctttcacatgagcgtttcagcttgtgctcatgggag
gtcgtgagagctgaaattgggagcatcctgagggatttttacattaaaacaaaaatgcca
agaaaacacgtgtga

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