Coregonus clupeaformis (lake whitefish): 121550720
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Entry
121550720 CDS
T08357
Symbol
tmc2b
Name
(RefSeq) transmembrane channel-like protein 2-B
KO
K21988
transmembrane channel-like protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121550720 (tmc2b)
03037 Cilium and associated proteins [BR:
cclu03037
]
121550720 (tmc2b)
Transporters [BR:
cclu02000
]
Other transporters
Pores ion channels [TC:
1
]
121550720 (tmc2b)
Cilium and associated proteins [BR:
cclu03037
]
Other cilia and associated proteins
Stereociliary proteins
121550720 (tmc2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Na_K-ATPase
Motif
Other DBs
NCBI-GeneID:
121550720
NCBI-ProteinID:
XP_041719010
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All DBs
Position
18:20476789..20500867
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AA seq
948 aa
AA seq
DB search
MPSQKKNDIAIKMEDVGIEIDGELDSGSEDEAKRRDRNRKARASPRAGRRKGKQATSEDE
DEEEDQDKARRKRARKKKARAQDSEEEEEEDDRSVKRKGTKAPGRKKKAVKEESEEESEE
EQGKKKKGGKVTSKKGKDEQNKEKKGDAKGKGGKDKKKKNGKDSSSSSSGESGDEDSLSE
GEMASLKEEVDEKKKLIATLRNKPWRMKRRLKLLKECQAFVERFEGALGKGKGRKLYAYK
VMMAKKMIKFNRDFDNFKTACIPWERKIKEVESHFGSSVASYFIFLRWMYGLNLVLFAFM
FGLVVLPEVMMGLPYGSIPRKTVPRAEQDRAMDISVLLDFGGYCKYSILFYGFYNDERTI
GVLQFRLPLSYLLVGVGIFGYSLMVVIRTMARNSDEGGDGGDDGQFTFAFKMFTSWDYLI
GNPETADNKYASITTSFKESIVDEQENQKDENIHLRRFLRVLANLFIICSLGGSGFLIYF
VVKRSQEFANLDQDELSWFEKNEVEFVMSLLGLVCPPLFETIAELEEYHPRIALKWQLGR
IFALFLGNLYTFLFALFDEVNTKLENEKSIRNATIWGLNEYYANYSSYHNTTDIPPPDIH
PADVIRGPCWETAVGIEFVKLTVSDIQVTYMTILIGDFLRAMIVRFLNYCWCWDLEAGFP
SYGEFDISGNVLGLIFNQGMIWMGAFYAPGLVGLNVLRLLTSMYYQCWAVMSCNVPHERV
FKASKSNNFYMGLLLLVLFLSLLPVVYTIMTLPPSFDCGPFSGREQMYNVVMETIENDLP
SFIGNIFTYATNPGLILPAVLLMVLAIYYLNATSKNYQNANLELKKKMQMARDEEKNRRN
NKESTNQVMQDLEDLLPNRSLITPATAEKPPPDNVREKGSKSPKVAKRPGAAANGKGVNL
QKDVSLAAPNPKAAVTHPPGPRGPPGNARGPPPGLARGRGRGAPPPRC
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgccttctcagaagaaaaatgacattgcaattaaaatggaagatgtgggaattgaaatc
gatggggagttagacagtgggagtgaggatgaggccaagcggagagacagaaacaggaaa
gccagagcctctccacgagccgggagacggaagggcaaacaggccaccagtgaggacgaa
gacgaagaggaagatcaggacaaggcacggaggaagagggctcgtaagaagaaagccagg
gcccaggacagcgaggaagaggaggaggaagacgacagaagcgtcaagcggaagggcaca
aaggctccgggcagaaagaaaaaggcagtcaaggaagagagcgaggaggagagcgaggag
gaacaagggaagaaaaagaaaggcggaaaagtgactagcaagaaggggaaagacgagcag
aacaaggagaagaagggcgatgccaaagggaaaggggggaaggacaagaaaaagaagaat
ggaaaggacagcagctcttcttcttcgggcgagtcaggggatgaggattctctgtcagag
ggggagatggcttctcttaaggaggaggtagatgagaagaagaagctgatagccactctc
aggaacaaaccgtggcgcatgaagaggaggctcaaactcctcaaggaatgccaggcgttt
gtggagaggtttgagggggctctaggaaagggcaaagggaggaagctctatgcctacaaa
gtcatgatggctaagaaaatgatcaagttcaaccgtgactttgacaatttcaaaacagcc
tgtattccgtgggaaagaaagataaaagaggttgagagtcactttgggtcatctgtggct
tcctacttcatcttcttgcggtggatgtacggtctaaacctggtcctgtttgcgttcatg
tttggtcttgtggttctcccagaggtgatgatgggtcttccgtatgggtctattcccaga
aaaactgttcccagagcggagcaggacagagccatggacatctctgtcctccttgatttt
ggtggttactgcaagtactctattctcttctatggtttctataatgacgagcgcaccatc
ggagtcctccagttcagactgccactgtcctacctactagttggtgtaggcatctttggc
tacagcctgatggtggtcattagaacgatggcccgtaactcagacgagggaggagacggt
ggggacgacggacagttcaccttcgcctttaagatgttcaccagctgggattacctcatc
ggcaaccctgagacagccgacaacaagtatgcctccatcaccaccagcttcaaggaatcc
atagtagacgaacaggagaaccagaaggatgagaacatccacttgcggaggttcctgcgg
gttctagccaaccttttcatcatctgcagcctggggggcagcggcttcctcatctatttt
gtggtcaagaggtctcaggagtttgccaacctagatcaggatgagctctcctggtttgaa
aagaatgaggtggagtttgtgatgtcactgctggggctggtgtgcccccctctctttgag
accattgctgagctggaggagtaccaccctcgtatcgccctcaagtggcagctgggccgc
atctttgccctgttcctcgggaacctctacacctttctgtttgccctttttgatgaagtc
aacacaaagttggaaaacgagaagtctattaggaatgccactatctggggtctgaatgag
tactatgccaactacagctcctaccacaacactactgacatccctcctccagacatccac
cctgctgatgtcatcagagggccgtgctgggagaccgccgttggcatagagtttgtgaag
ctcaccgtctctgacatccaggtgacatatatgaccatcctgattggtgacttcctgcga
gccatgatcgtgcgtttcctcaactactgctggtgctgggacctggaggctggatttcca
tcttatggagaatttgacatcagcggcaacgtgcttggattaatcttcaatcaaggaatg
atttggatgggtgcgttctatgcccctggcctggtagggttgaacgtcttgcgtctcctc
acctccatgtactaccagtgctgggccgtgatgagctgtaacgttccccatgagagggtc
ttcaaggcctccaaatccaacaacttctacatgggcctcctcctcctggtgctcttcctc
agccttctgcccgtggtttacaccataatgactctgccgccctccttcgactgtggcccc
ttcagcggaagggagcaaatgtataatgtcgtcatggagactatagaaaacgacctacca
tcattcattgggaatatcttcacctacgcaactaatcctgggctgatcttaccagcagtg
ctgctgatggtgttggccatctactacctgaatgcgacctccaaaaactatcaaaatgcc
aacctggaactgaagaagaagatgcaaatggctagagatgaggagaagaaccggaggaac
aacaaggagagcaccaaccaggtgatgcaggacctggaggacctcctgcccaaccgttct
ctgatcacccctgctactgcggagaagcccccaccagacaacgtgcgcgagaagggaagc
aaatctcccaaggtggcaaaacgtccaggagcagcagccaatggcaagggggttaacctt
cagaaggatgtttcattggctgcaccaaaccccaaagcggctgtgacccatcccccaggc
ccaagggggccgcctggaaacgccagaggaccacccccagggctggcgaggggcagaggg
aggggcgcacctccccctagatgctaa
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