Coregonus clupeaformis (lake whitefish): 121550722
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Entry
121550722 CDS
T08357
Name
(RefSeq) sarcoplasmic/endoplasmic reticulum calcium ATPase 2 isoform X1
KO
K05853
P-type Ca2+ transporter type 2A [EC:
7.2.2.10
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04020
Calcium signaling pathway
cclu04148
Efferocytosis
cclu04260
Cardiac muscle contraction
cclu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121550722
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121550722
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
121550722
04261 Adrenergic signaling in cardiomyocytes
121550722
Enzymes [BR:
cclu01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.2 Linked to the hydrolysis of a nucleoside triphosphate
7.2.2.10 P-type Ca2+ transporter
121550722
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Gene cluster
GFIT
Motif
Pfam:
Cation_ATPase
Cation_ATPase_C
E1-E2_ATPase
Cation_ATPase_N
Hydrolase
Hydrolase_3
HAD
DUF4833
Motif
Other DBs
NCBI-GeneID:
121550722
NCBI-ProteinID:
XP_041719011
LinkDB
All DBs
Position
18:54919470..54962852
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AA seq
1042 aa
AA seq
DB search
MDNAHTKSVEEVYSHFSVNESTGLGLDQVKRQKEKWGSNELPAEEGKSLWELVIEQFEDL
LVRILLLAACISFVLALFEDGEETITAFVEPFVILLILIANAIVGVWQERNAEDAIEALK
EYEPEMGKVYRQDRKTVQRIKAKEIVPGDIVEVAVGDKVPADIRLSSIKSTTLRVDQSIL
TGESVSVIKHTDPVPDPRAVNQDKKNMLFSGTNISSGKAIGVVVATGVNTEIGKIRDEMA
ATEQEKTPLQQKLDEFGEQLSKVISLICIAVWMINIGHFNDPVHGGSWIRGAVYYFKIAV
ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ
MSVCRMFILDQAEGNSCSLNEFTITGSTYAPEGEVYQDGRLVKSSAYDGLVEIATICALC
NDSSLDYNEAKGVYEKVGEATETALTCLVEKMNAFDTDVKGLSKIDRANACNSVITQLMK
KEFTLEFSRDRKSMSVYCTPNKARASLGKMFVKGAPEGVIDRCTHVRVGTNKVAMTPGIK
ERIMSTIREYGTGRDTLRCLALATRDAPPRKEHMVLVDCARFAGYESDLTFVGCVGMLDP
PRTEVAASIKLCRLAGIRVIMITGDNKGTAVAICRRIGILSEEDDVDKMAFTGREFDDLS
PQAQRDAVTNARCFARVEPSHKSKIVEFLQGMDEITAMTGDGVNDAPALKKAEIGIAMGS
GTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALG
FPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRSAKEPLISGWLFFRYLAIGC
YVGAATVGAATWWFVAAEDGPMISLYQLSHFLQCSPDNPDFADLDCHVFESPYPMTMALS
VLVTIEMCNALNSLSENQSLLRMPPWENIWLLGAICLSMSLHFLILYVEPLPVIFQITPL
DLTQWLVVLKISLPVILLDELLKFVARNYLEPGNQPEYKSAGKGWSPSACTEGISWPFVG
ITLPLMLWLYSIDTNVSALFWS
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggataacgctcacacaaagagtgttgaagaagtttatagccatttctccgtcaacgaa
agcactggacttggtttggaccaggtgaaacgtcagaaggagaaatggggctcgaacgag
ttacctgctgaagaagggaagtctctatgggagcttgtcattgaacaatttgaagattta
ctcgtacgaattcttctgctggcagcttgtatatcttttgtcttggccttgttcgaggac
ggagaagaaacaatcacagcctttgtggagccttttgtaatcttactcattcttatagcc
aatgccatcgtgggtgtgtggcaggaacgcaatgctgaggatgccattgaagcccttaaa
gagtacgagcctgagatgggcaaggtctaccgccaggacaggaagaccgttcagaggatc
aaggccaaagaaatcgtgccaggagacatcgtggaggttgctgttggagacaaggttcct
gcagacatccgtctctcttccatcaaatctacaaccctgagagtagaccagtctatcctg
accggcgagtccgtctctgtcatcaagcacaccgacccagtgcctgacccccgagctgtc
aaccaggacaagaagaacatgctcttctctggcaccaacatctcatcaggcaaggctatt
ggtgtggtggtggccacaggcgtgaacactgagatcggtaagatccgtgatgagatggca
gccaccgagcaggagaagacccccctgcagcagaagctggatgagtttggggagcagctc
tctaaggtcatctccctgatctgcatcgctgtgtggatgatcaacattggccacttcaac
gaccctgtccacggaggctcctggatccgcggcgccgtctactactttaagattgccgtg
gccctggctgtggccgccatacccgagggtctgcccgctgtcatcaccacctgcctggcc
ttgggcacccgccgcatggccaagaagaacgccatcgtccgcagcctgccctctgtggag
accttgggctgcacctctgtcatctgctccgacaagactggcaccctcaccaccaaccag
atgtctgtctgcaggatgttcatccttgaccaggccgaggggaacagctgctctctgaac
gagttcaccatcactggctctacctacgcccctgagggagaagtgtaccaggatggcaga
ctagtgaagtcctctgcgtatgatggtctagtggagattgccaccatctgtgccctgtgc
aatgactcctctctggactataacgaggccaaaggtgtgtatgagaaggttggcgaggcc
acagagacggccctcacctgcctggtggagaagatgaatgcgtttgacaccgacgtcaaa
ggcttgtccaagatcgacagggccaatgcctgcaactctgtgatcacacagctgatgaag
aaggagtttaccctggagttctcgagagacaggaagtccatgtctgtgtactgcaccccc
aacaaggcccgcgcttccctcggaaagatgtttgtcaagggtgccccagagggagttatt
gacagatgtacccatgtcagggtgggcacaaacaaggttgccatgaccccaggcatcaag
gagaggatcatgtctacaatccgagagtacgggacggggcgtgacaccctgcgctgccta
gctctggccacccgggacgccccacccaggaaggagcacatggtgcttgtcgattgtgcc
cgtttcgctggttatgagtctgacctgaccttcgtgggctgcgttggcatgctggaccca
cccaggacagaggtggctgcctcaatcaagttgtgccgcctggccggcatccgagtcatc
atgatcactggcgacaacaagggcactgccgtggccatctgccgccgtatcggcatcctg
agcgaggaggacgacgtggacaaaatggcgttcacgggccgcgagtttgacgacctgtcc
ccccaggcccagcgcgatgccgtgaccaacgcccgctgctttgcccgtgtcgagccctcc
cacaagtccaagatcgttgagttcttgcagggcatggatgagatcacggccatgactggt
gatggagtgaacgatgcccctgccttgaagaaggcagagattggcatcgccatgggctct
ggcactgccgtggccaagtcagcctctgagatggtcctggccgatgacaacttctcttcc
atcgtggcggctgtggaggagggcagggccatctacaacaacatgaagcagttcatccgc
tacctcatctcttctaatgtgggagaagtcgtctgtatcttcctgactgctgctctgggc
ttccctgaggcgctgatcccagttcagctgctgtgggtcaacctggtgacagacggtctc
cctgccaccgcactgggcttcaacccccccgaccttgacatcatgaataagcccccccgc
agcgccaaggagcccctcatctccggatggctcttcttcagatatctggccatcggatgc
tatgtgggagctgccacagtgggagccgctacttggtggttcgtggctgctgaggatggc
cctatgatctctctgtaccagctgagccacttcctgcagtgttctcctgacaaccctgac
ttcgctgacctggactgtcatgtgtttgagtcaccctaccccatgaccatggccctgtct
gtgcttgtcactattgagatgtgcaatgcccttaacagcctgtcagagaaccagtccctg
ctgcgtatgcccccctgggagaacatctggctgctgggggccatctgcctctccatgtcc
ctccacttcctcattctctacgtggagccactgcctgtcatctttcagattacccctctg
gacctgacccagtggctggtggtgctgaagatctccctgcccgtcatcctgcttgatgag
ctgctaaagttcgtggccaggaactacctggaacccggtaaccagccagagtataagtca
gccggcaaaggctggtccccctctgcatgcaccgagggcatctcctggccctttgtgggc
atcaccctccccctgatgctgtggctctacagcatcgacactaacgtgtctgccctgttc
tggtcctga
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