Coregonus clupeaformis (lake whitefish): 121550837
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Entry
121550837 CDS
T08357
Symbol
pomt1
Name
(RefSeq) protein O-mannosyl-transferase 1 isoform X1
KO
K00728
dolichyl-phosphate-mannose-protein mannosyltransferase [EC:
2.4.1.109
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00514
Other types of O-glycan biosynthesis
cclu00515
Mannose type O-glycan biosynthesis
cclu01100
Metabolic pathways
Module
cclu_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
121550837 (pomt1)
00514 Other types of O-glycan biosynthesis
121550837 (pomt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121550837 (pomt1)
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.109 dolichyl-phosphate-mannose---protein mannosyltransferase
121550837 (pomt1)
Glycosyltransferases [BR:
cclu01003
]
O-Glycan biosynthesis
O-linked Man type
121550837 (pomt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMT
PMT_4TMC
MIR
Motif
Other DBs
NCBI-GeneID:
121550837
NCBI-ProteinID:
XP_041719140
LinkDB
All DBs
Position
18:complement(22939947..22950998)
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AA seq
722 aa
AA seq
DB search
MLTSIKLPIVIRAEINLVLVVVTALGLLSRLYGINFPKAVVFDEVYYGQFVSLYTKQVFF
VDESGPPLGHMILAFGAHLGGFDGNFIWNRIGAEYSSNVPVWSLRLIPALAGSLCVPLCY
LLVVELGYSHLTALGAALLFLMENSLIVQSRFMLLESVLIFFLLLAVVSYLRFHNAQSSS
QVRLAWLVLTGVTCACAVGVKYMGLFTYFLLLGLATVHTWQLIGDRALSNSVVLMQVVTR
FLALVVLPLLLYLGFFYVHLTLLYRSGPHDQMMSSAFQASLEGGLARITQGQPLDVAYGS
QVTLRSVSSKPIPCWLHSHKANYPIRYENGRGSSHQQQVTCYPFKDVNNWWIIKDPGRQD
LVVSSPPRPVRHGDVVQLLHGMTSRLLNTHDVAAPMSPHAQEVSGYIDFNVSMPAQNLWK
VDIANREAEQEVWKTILSEVRLIHVNTSAVLKLSGSSLPEWGYRQLEVVGDKIYKGYQPS
GVWNVEEHRYGRSQEQKERELELHSPTHIDINRSLTFIAKFLELQWKMLTVKHEESEHKY
SSSPLEWITMNTNIAYWLHPASNAQIHLIGNFVTWTLANLALAVYVLLFLSYLLRRRRNI
EDIPEATWCQLLQAGVVCAGGWAVNYLPFFMMEKTLFLYHYLPALTFQILLIPVVLEHLH
THMLRCASHRRALHGVVLAGLSSVYLSFRTFSPLTYGQPELSAEQLASLRWRDSWDILFR
RR
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgtctatcaagctgcctattgtgatcagagccgaaatcaatttggttttggtg
gtagtgacagcccttggacttttgtccagactgtatggaattaacttccctaaagctgtt
gtgtttgatgaggtgtactatggacagtttgtatctctctacacaaaacaggtcttcttt
gttgatgagagtggaccacctcttggtcacatgattctagcatttggagctcatcttggt
ggatttgatggtaactttatctggaacaggattggagcagagtactccagtaatgtgcct
gtatggagtttaagactgataccggccctggccgggtcactgtgtgtacccctgtgttac
cttctggtagtggagctcgggtactcacacctcacagcactgggggctgcattgctcttc
ctcatggagaattccttgattgttcagtcccgcttcatgctgctggaatctgtactgatc
ttcttcctgctgctcgctgtcgtatcctacctccggtttcacaatgcacaaagcagctca
caggtcagattggcgtggctggtgctgactggagtcacatgtgcctgtgctgtgggagtg
aagtacatgggtctattcacctactttctgctgctgggcttggcgaccgtgcacacgtgg
cagcttattggggacagagcactgagcaatagtgtggtgctgatgcaggtagtgacccgc
ttcctggccctcgtggtcctacccctactactctacttgggcttcttctatgtccattta
accctgctctaccgcagtggcccacacgaccagatgatgagcagtgccttccaggccagc
ctagagggaggattggccaggatcactcagggccagcctctggatgtggcctatggctct
caggtgaccctccgcagtgtgtccagtaaacccatcccctgctggctacactcccataag
gccaactatcccatcaggtatgaaaatgggcgtggtagctctcaccagcagcaagtgacc
tgttatccattcaaagatgtcaacaattggtggataatcaaagatccaggaagacaagac
cttgttgtgagcagccctccccgccctgttcgccatggtgatgttgtccagcttcttcac
ggcatgacctcccgcctcctcaacacgcacgacgttgcagctcccatgagtcctcacgca
caggaagtgtctggctacattgacttcaatgtgtcaatgccagcccagaatctctggaaa
gtggacattgcgaacagggaggcggaacaagaggtctggaagactattctgtctgaagta
cgtttgattcacgtcaacacctcggctgtgctcaagctgagtgggtcctcccttccagag
tggggctacagacagctggaagtggtgggagataagatctacaagggctaccagcccagc
ggggtgtggaatgtagaggaacaccgctacggcaggagtcaggagcagaaagagagagag
ctggagctacactcccccacacacattgacatcaaccgcagcctcaccttcattgcaaaa
ttcctggagctacagtggaagatgctgacggtaaagcatgaggagtctgaacacaagtac
agctcttcacctctagaatggatcactatgaataccaacattgcatactggctccacccc
gcaagcaatgcccagatccacctgattgggaactttgtcacttggaccctggcaaacctc
gcccttgctgtgtacgttcttcttttcctatcgtatctattaaggaggcgacggaacatt
gaagacattccagaagccacctggtgccagctgcttcaggcaggagtggtgtgtgctggt
ggctgggccgtcaactacctgcccttcttcatgatggagaagacgctgttcctgtatcac
tacctgccagcgctcaccttccagatccttctgatccctgtggttctggagcacctgcac
acacacatgctgcggtgtgcttctcaccggcgtgctcttcatggagttgtattggcgggg
ctgtcctcagtatatctgtccttccggaccttcagtcctctcacctatggtcaaccagag
ctgagcgctgagcagctggcgtcgctgcgctggagggacagttgggacatcttgtttcgc
agacgttaa
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