Coregonus clupeaformis (lake whitefish): 121550871
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Entry
121550871 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: toll-like receptor 12
KO
K18808
toll-like receptor 13
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cclu04054
]
121550871
Pattern recognition receptors [BR:
cclu04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
121550871
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GFIT
Motif
Pfam:
LRR_8
TIR_2
TIR
LRR_4
LRR_5
LRR_EndoS
LRR_9
Motif
Other DBs
NCBI-GeneID:
121550871
NCBI-ProteinID:
XP_041719201
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Position
35:complement(33515162..33520072)
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AA seq
960 aa
AA seq
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MRGMFSHPAVLFLWIQSASGWMHPKCQIYDSGEDLGDFATWTCTYLRHHEEHYTAACEDV
TAIEEDLLGLPPNINNLCITMTHAENRSMSLGFFSQFQYLEYLNIDGSFAQILPTGNSHL
PNLEHMYLIGKWVMGSGCCDCHIGPHTFRDLVKLSHLYIQGYRLRAMAPDVFHGIPQLQI
FSIGEPCEEDLSEILCRIMNIKSLIKISVNAPVIQSLNQSNCSNNNQNVTSVFNNLTRVD
LLFDEITHIEEGAMAWLQNLTILNAAFSQEVLLRLPLSGIKQIQYFSCFGSNDIDIESIC
NVVFLLSIKQIYLYNANTSSLSMSSVELCIGLEYMHLSGPGAIYPTPHLKWNFISSLKNL
NQLRIDGLTDNILDICSCQKQPITWLTKLTLELNNPQILFAKQFSCLVKLQYLDLTHNFI
SNIEDFAFLGLTNLESLNITRNNITQIHANTFFGLSSLTRLDLRNNPLIHNIEAMSFTHL
TSLKQVFLGQVHNPLTEPVIKLNLTLIFGGILSQLSHLYISSAMRPMLLTIGSNITSKQN
LSLQLKGQTVSFEDCDRPFFQSVTHLNTDAEEFLCGSEFMGKYFTSVETFDYRSKLSAKS
VDLTSINQLIHLRKLALRRVDLLIQRSANIIFHNLTKLEVLELYNCRIYSLEGSLTKDLK
SLKTLYLHIENIYNVFYSFTEPLSSLKYLILFKFQMFCSCDNAWLITWAKGYRQVEVLML
SPYSHPVMYALEDLICLSDNGIDTPNFVKYTEDNCSTEVDFVLFAATGLGVLFFMLVVLV
HNLAGPYLLPLYHITLGWLSEAMRSNTRGRYHYDAFVSYSGKDEHWVVEDLLPNLEQRGP
PFLRLCLHSRDFQLGKDIVENITDSLYQSRHTLCLVSRHYLRSNWCSLEMKLATSRLQVE
QRDVILLVFLEKXPPRQLSAHHRLARLVKTRTYLDWPQDPNQHQAFWDRLWAKLKPQTEA
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgagaggtatgttttcccaccctgcagtcctgttcctgtggattcagagtgctagcgga
tggatgcatcccaaatgccagatttatgacagtggtgaagacttgggagactttgccacc
tggacctgcacctacctacgtcatcatgaagaacattacactgctgcctgtgaagatgtt
acagccatcgaggaagatctacttggacttccccctaatatcaataacctctgcataact
atgacacatgccgaaaatagatccatgtctcttggctttttctctcagtttcagtatctg
gagtacctgaacattgacggcagttttgctcaaatccttccaactgggaatagccacctt
ccaaatctggaacacatgtacttgataggtaaatgggtaatgggctctgggtgttgcgat
tgtcatattgggcctcatacattcagagatctagttaagttaagtcatttgtatatacag
ggttacaggttaagagcaatggccccagacgttttccatggcatccctcagttacaaata
ttcagcattggtgaaccctgtgaagaggatttgtcagagatactatgcagaataatgaat
ataaagtcacttataaagataagtgtaaacgcaccagtgatacaatcgttaaaccaatca
aactgctccaacaacaaccaaaacgtgacatctgtttttaacaatctaacaagagttgac
ttattatttgatgaaataacacatatagaggaaggtgcaatggcttggctccagaacctg
acaattttaaatgcggctttcagccaggaagtcctactgcgccttcccctttctgggatt
aagcaaatccagtacttcagttgctttggtagcaatgacattgatattgaaagtatctgt
aatgtcgtgtttttgctttcaatcaagcaaatatatttatacaatgccaatacaagcagc
ctctctatgtccagtgttgaattgtgcattgggctagaatatatgcatttatctggacct
ggagccatctatcctactccccatttgaaatggaatttcatttccagtctcaaaaacctt
aatcaattaagaatagatggcctgacagataacatacttgatatttgctcctgccaaaaa
caaccaatcacatggttaacaaaactcactttagagttgaacaatccacaaatacttttt
gcaaaacaatttagctgtcttgttaaactgcagtacctggatttaacacataattttatt
tcaaacattgaagactttgctttcctgggattgacaaatctggagtccttaaacattaca
agaaacaacataacacagatccatgcaaacacattttttggtttaagtagtttgacacgt
ttagacctcaggaacaatccacttattcacaacattgaggcaatgtctttcacacacctc
acgtctctaaaacaagtgtttctcgggcaagtgcacaatccactaacagaacctgtgatc
aagctgaatctgacacttatatttggtggcattctgagtcagctgagtcatctgtacatt
agttcagctatgaggccgatgctgttgactatcggcagtaacatcacatctaaacagaac
ctgagtctccagctcaaaggccagacggtttcatttgaagactgtgacagaccgttcttt
cagtcggtaacccatcttaatactgatgctgaagaattcctttgtggatctgaattcatg
ggaaagtacttcacgtctgtggagacatttgactacagatctaagctttcagctaaaagt
gttgatttaacatcaattaatcagctgattcacctgaggaaactggctctaagacgggtg
gatcttttaatacagcgttctgccaacatcatttttcacaacctgaccaaactggaggtt
ctggaactttataactgcaggatttattctctggaggggagtttaactaaagacttaaaa
tctttgaaaacattgtatttgcatatcgagaacatttataatgtattctacagctttact
gaacctctctctagccttaagtatttgatactttttaagtttcagatgttttgcagttgt
gacaatgcttggctcattacatgggccaaggggtacaggcaagttgaggtgctcatgctt
tctccgtattcacatccagttatgtatgctctggaggatttgatatgcttgtcggacaac
ggaatagacacacctaattttgtaaagtacacagaagacaactgctcaacagaggtggac
tttgtgctctttgctgcgactggtctgggagtcctgttcttcatgctggtggtgttggtt
cacaacctggccggcccctacctcctccccctctaccacatcacccttggctggctgtcg
gaggccatgcgatccaacaccagggggcgctaccactacgatgcgtttgtctcctacagc
gggaaggacgaacactgggtggtggaggacctgcttcccaatttggagcagaggggtcct
cctttcctgcgcctctgtctgcacagcagggacttccagctggggaaggacattgtggag
aacatcacagacagcctctaccagagccgccacaccctctgcctagtcagccgccactac
ttgcgcagtaactggtgctccctggagatgaagctggccacctccaggctgcaggtggag
caaagggacgtcatcctcctggtcttcctggagaagnatccccctcgccagctgtctgcc
caccacaggctggctcgcctggtgaagaccaggacctatctggactggccccaagacccc
aatcagcaccaggcattctgggacagactgtgggctaaactgaaacctcagactgaagcg
tga
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