Coregonus clupeaformis (lake whitefish): 121550877
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Entry
121550877 CDS
T08357
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121550877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
121550877
03036 Chromosome and associated proteins [BR:
cclu03036
]
121550877
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121550877
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
121550877
PBAF complex
121550877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
GCN5L1
Sarcoglycan_2
Motif
Other DBs
NCBI-GeneID:
121550877
NCBI-ProteinID:
XP_041719205
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All DBs
Position
35:25549884..25558244
Genome browser
AA seq
435 aa
AA seq
DB search
MSKRPSYAPPPTPAPTTQVPNTPGFVGYNPYSHLAYNNYRLGGNTGSNNRVMNSSGITVP
KPPKPPDKPLMPYMRYSRKVSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTEEEKQDYL
NEYEAEKIEYNDSLKAYHNSPAYLAYINAKNRAEAALEEESRQRQTRIEKGEPYMSIQPA
EDPDDFDDGFSMKHTATARFQRNHRLISDILSEIVVPDVRSVVTTARMQVLKRQVQSLMV
HQRKLEAELLQIEDRHQDKKRRFLETTDSFNSELKRLCGQKVEVDMEKLAAEIAAAEEAA
RRRAEEREKEAAEQAEKAAQEQQQAAAASASSTLPNTEQNTIPPTTETKEDQDKPIPMET
EETPASETSETQPEAEEGTLTPAAEKQHGPPVESITDEGTSDSTAPSESSTGPPADPPAS
AEPAPEERPASQPSQ
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaggccatcatatgcacctccccccaccccagcccctacaactcaagtgccc
aacacccctgggtttgtggggtacaacccatacagccatctggcctacaacaactacagg
ctgggagggaataccggcagcaacaacagggtaatgaattcctcaggaatcactgttccc
aagccacccaaaccgccagacaagccgctgatgccctacatgcggtacagccggaaggta
agcaggaaggtctgggaccaagtcaaagcctccaatccggatctgaagttatgggagatt
ggaaagattattggtggcatgtggagggacctcactgaagaggagaagcaggactacttg
aacgaatatgaagcggaaaagattgagtacaacgactccctgaaggcctaccacaactca
ccggcttacctggcctacatcaacgccaagaaccgtgccgaggcggctctggaggaggag
agcagacagcggcagacccgcatcgagaagggagaaccttacatgagcatccagcctgct
gaagacccagatgactttgacgatgggttctccatgaagcacacggccactgctcgcttc
cagaggaaccaccggctcatcagtgacatcctcagtgagatcgtggtgccagatgtgcgc
tctgtcgtcaccactgcacgcatgcaagtccttaagcgccaggtccagtccctcatggtg
caccagaggaagctggaagcagaactgctgcaaatagaggaccgtcaccaggacaagaag
aggagattcctggagactacagactccttcaacagtgagctcaaacggctgtgcggtcag
aaggtggaggtagacatggagaagctggcagcagagatagctgcggcagaggaggctgct
aggcggcgggcggaggagagggagaaggaagcggcggagcaggcagagaaggctgcccag
gagcagcaacaggcggcagcagcctccgcttcgtctacactgcccaacactgagcagaac
accatcccaccaaccacagagaccaaggaggaccaggacaagccaatccctatggagaca
gaagagacacctgcatcagagacatctgagacccagccagaggctgaggagggcacgctg
acccctgctgcagagaagcagcacggcccgccggtggagagcatcacggacgagggcacc
agtgacagcaccgccccatccgagagcagcaccggaccccctgcagacccccctgcttca
gctgagcctgccccagaggaacgcccagccagccagccctcccaataa
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integrated database retrieval system
