Coregonus clupeaformis (lake whitefish): 121550883
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Entry
121550883 CDS
T08357
Name
(RefSeq) rho GTPase-activating protein 27 isoform X1
KO
K20636
Rho GTPase-activating protein 12/27
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121550883
Membrane trafficking [BR:
cclu04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
121550883
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
WW
PH
PH_9
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
121550883
NCBI-ProteinID:
XP_041719221
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Position
35:25583153..25612028
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AA seq
929 aa
AA seq
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MSTFGVPLEFHDPPPVAFKRGGLNDSLPGLHSYVAPEVPLTANDSAKHKKQLSLASGVLF
GSSHTLSVEEPLSLNPRAPSFSPADPLHQPSQAIPVETPIIPDAEVTGGGISHQEPLKEP
ESPLVLEEGEEEKSSVEPEDESKENIYESILDLKLDESPIILETAPTVSPAAVAVAEPTP
VIAPTSPSPTQTQVDNASPNTAVYATVTELKKNTPQSPPVVALSPDLPLSQEGWQVHTDK
DSGKEFYHHPATGQTTWADPRSTLPSTDMELTKEALAVPALSPALSPALSPALSPASSQG
SNWEQVLDETTGRNYFYNPTSGATSWAAPEPISPFSPVTEPPVLKLPDGGPVGPPLPKED
YLTEDHEAPDTSSSVFPKDLLPMPQAKQAVIPRAILDVSVPAGWKRSMDADGKTVFISER
TQEQWFKSVDQKGKTYYYLRDGSRSQWNLPAELPVAPSLPKVGNGVDQDSLPVLKNWRHT
MGPAQFGPSQEDNRFFPTHRRNVSDVTSEASSSGNSPETPHHTDRLGVRSRLSHLSTDSH
EHTHLPEKAGILNKTRVADNGKRIRKNWSQSWTVLHGGILTFHKDPKSAPSGNSNKTNQI
TPEYTVELRGATVGWAPKDKSSKKNVLELKTRHGCEYLVQYDTESIICDWHKIILDTVRH
LDQDHLSEEEEEEPMEKSPLASDRDKRTSSTKITPGISAESSDQGRVRTKLRKFLQRRPT
LQSVKEKGYIRDNVFGCHLDTLCHRENSTVPRFMEKCIRAVEIRGLDIDGIYRVSGNLAV
IQRLRHKADHEENLDLEDGQWEEIHVITGALKLFLRELPEPLFPYSFFDKFIAAIKIQDY
PQKVSYFRDLVRSLPLPNHDTMHLLFKHLLKVIEFGEKNRMSVQSVAIVFGPTLLRPQTE
SANITVYMVFQNQIVELILKEFETVFAPS
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgtccacattcggcgtacccttagaattccacgacccgccccccgtggctttcaagcgc
ggcgggcttaacgattcgctgccgggccttcactcctatgttgcccctgaggttccctta
acagccaacgatagtgccaaacacaagaagcaattaagcctggcttccggtgtgctcttc
ggctcctcccacaccctgtcggtggaggagcctctctccctgaacccccgagcccccagc
ttcagcccagctgaccccctccaccagccctcccaggccatcccagtagagacaccaatc
attcctgatgccgaggtcaccggtggcgggatttcccaccaggaacctctgaaagagccg
gaatctcctctggtgctagaggagggagaagaagagaaatctagtgtggagcctgaggac
gaatcgaaggagaatatttatgaatccatattggacctgaagctggatgaatcccctata
atattggagacggccccgactgtgagtcctgctgctgtggctgtggctgaacctacacct
gttatcgctcccacttctccatctccaacacagacacaggtggacaatgccagccccaac
actgctgtttacgccaccgtcaccgagctgaagaaaaacaccccacaatcccctccggta
gtagctctgagtcctgacttgccccttagccaggagggatggcaagtgcacactgacaag
gacagtgggaaagagttctatcaccacccggccacgggccaaaccacttgggccgacccc
cgcagcaccctcccctccacggacatggagctaaccaaggaggcactggctgtcccggcc
ctgtccccagccctttccccggccctgtccccggccctctcaccagcctcatcccagggt
tccaactgggaacaggtgttggatgagaccaccggtcgaaactacttctataaccccaca
tctggggccacgtcctgggcagctccggagcccatctcccctttctctcctgttactgag
cctcctgtgctgaagctcccagacggaggaccggtagggccccctctcccaaaggaagac
tacctgacagaagaccacgaggctccagacacctcctcctctgtgttccccaaagacctc
ctgcccatgccgcaggccaaacaggctgtcatacctcgggccattctagacgtcagtgtc
ccggcgggctggaagcgctccatggatgcagatgggaagaccgtattcatcagcgaacgc
acacaggagcagtggttcaagtctgtggatcaaaaaggaaagacgtactactacctgaga
gacggctccagatcccagtggaaccttccagcagagctcccggttgcacccagtctgccc
aaggtggggaatggagtggaccaggacagcctgccggttctgaagaactggagacatacc
atgggcccagctcagtttggcccctcccaagaagacaacaggttctttccaacacatagg
agaaacgtttcggacgtcaccagtgaagcatccagctcaggcaactcccccgagacgcca
caccatactgataggttgggagtacggagtagactgtcacatctgagcacagactcacat
gagcacacacatctaccggagaaggcagggatcctgaacaaaaccagggtggccgacaat
gggaaaagaattaggaagaattggagtcagtcatggacagtgctgcatggaggcatcctc
acgtttcacaaagacccaaaatctgcaccctcgggaaactctaacaagaccaatcagatc
accccagagtacacagtggagctgcggggagccactgtgggctgggcccccaaggacaag
tccagcaagaagaacgtactggagttgaagacgcgtcatgggtgtgagtacctggtccag
tatgacacagagagcatcatttgtgactggcacaagatcatactggacaccgtcagacac
ctggaccaagatcacttgtcggaagaggaagaggaggagcctatggagaaatctccactt
gcttcagacagagacaagaggaccagctccaccaaaattacgccaggcatcagtgcagag
tcatcagatcaggggcgtgtccgcaccaaactacgcaagttcctccagaggaggcccaca
ctgcagtcagtgaaggagaagggctacataagagataatgtgtttggttgtcatctggac
accctgtgccatcgagagaacagcactgtgcccaggtttatggagaaatgcatcagggca
gtggagattagaggtctggacattgatgggatctacagagttagtgggaatctagctgtc
attcagagactacgccacaaagcagatcatgaggaaaatctggacctggaggatggtcag
tgggaggagatccatgtgatcacgggggcgctgaagctcttcctgagggagctgcctgaa
cctctcttcccttacagcttcttcgacaagtttatcgctgccatcaaaatccaggactat
ccccagaaggtgtcgtacttccgtgacctggtgaggtccctccctctgcccaaccatgac
accatgcacctcctcttcaaacacctcctcaaagtgattgagtttggtgaaaagaaccgt
atgtcagtccagagtgtggccatcgtgtttggtcctacgttactcaggccccagactgag
tcggccaacatcactgtttacatggtcttccagaaccagattgtggagctcatcctcaaa
gagtttgagacggtgtttgcccccagctga
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