KEGG   Coregonus clupeaformis (lake whitefish): 121550889
Entry
121550889         CDS       T08357                                 
Name
(RefSeq) histone deacetylase 5-like isoform X1
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04371  Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    121550889
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cclu03036]
    121550889
Enzymes [BR:cclu01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     121550889
Chromosome and associated proteins [BR:cclu03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     121550889
SSDB
Motif
Pfam: Hist_deacetyl HDAC4_Gln
Other DBs
NCBI-GeneID: 121550889
NCBI-ProteinID: XP_041719231
LinkDB
Position
35:23803563..23890525
AA seq 1144 aa
MLLRPTVPGLCAMLQTIYETESCFSSDAMSSREQPLELLPQSQVSAMPIAAVEVKTTLPS
GMQSPVGGSEQGVGGGGGGGPVDLRTDPRLGPLGGGVDPGMREQQLQHELLLLKQQQELQ
KQLLFAEFQKQHEVLTRQHEVQLQEHLKASLQQQQEILAAKRQQELEQKRKLEQQRHEEL
EKQRLEQQLLMLRNKEKGKESAIASTEVKLKLQEFLLSKKEPGTPGGLNHSFPQKCWGAH
HTSLDQSSPPQSNTPGTPPSYKLPPLLGTYEGRDDFPLRKTASEPNLKVRSRLKQKVAER
RSSPLLRRKDGTVISTFKKRAIEISVSSMCSSAPGSGPSSPNSSNSAIAENGSSGSVPNI
HAEQLRSLHQTLNADGTVSPLSLYTSPSLPNISLGLPANSHLTANQKLLQEAERQAIQTM
RQGGALTGKFVSTSSLPASCLPPGMQHDLESPQAPNSHSSHSSLLQHVLLLEQARQQSAL
LSVPMYGQSPLVTGEWVSNSMRTVNKLPRHRPLSRTQSAPLPQSPQALQQLVMQQQHQHF
LEKQKQYQLNKILSKGVELPRQPPTHPEETEEELTETQEMQEEGSGAGSERLGEGRLQEQ
RLQKEGSGETSPPSERLLTPLKGESTESDLEEEDDEDEAIELRECDEEGVPFGQHHLQQL
NVFQASLSISGMPHRPLGRAQSSPATASLKGAHMGEVPIKHLFTTGLVYDTFMLKHQCMC
GNTHIHPEHAGRIQSVWSRLQETGLLGRSERIRGRKATLDEIQTVHSEYHTLLYGTSPLN
RQKLDSKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSGAVRMAVGCVIELAFKVAAG
ELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKLLKQKLGVGKILIVDWDIHHGNGTQ
QAFYNDPNVLYISMHRYDDGNFFPGSGAPEEVGVGPGVGFNTNIAWTGGVEPPMGDVEYL
TAFRTVVMPIANEFSPDVVLVSAGFDAVEGHQSPLGGYNVTAKCFGHLTKQLMKLAGGRV
VLALEGGHDLTAICDASESCVAALLGDELDPLPQAVLQQKPCPKAAASLERVIEIQSKHW
SSLQRLAPTVGQSLMDAQRREKDEADTVTAMASLTVDTEQAAASTVSTETSRSTEEPMEE
EPVL
NT seq 3435 nt   +upstreamnt  +downstreamnt
atgcttttaaggcccactgtgccggggctgtgcgcaatgttgcagacgatctatgagaca
gaatcctgcttctcctcagacgccatgtccagcagggagcaacctctggagctgctgccc
cagtcccaagtgtctgccatgcccattgctgctgtggaggtgaagacaactctcccctcg
gggatgcagagcccagtgggcggcagtgagcagggtgttggaggtggaggtggcggcggt
cccgtggacctgaggacggatcccaggctgggacccctgggcggaggggtggacccaggc
atgagggagcagcaactgcagcatgaactgcttctcctcaagcagcagcaggagcttcag
aaacagcttctcttcgctgagttccagaagcagcatgaggtgctgacacgccagcatgag
gttcagctgcaggagcacctgaaggcgtccctgcagcagcagcaggagatcctggcggcc
aagcggcagcaggagctggagcagaagaggaagctggagcaacagaggcatgaggagctg
gagaaacagaggctggagcagcagctcctcatgctacgcaataaggagaagggcaaagag
agtgccattgccagtacggaggtgaagctgaagctccaggagttcctcctgagcaaaaaa
gagcctggcacacctggcggactgaaccattccttcccccagaaatgctggggcgcccac
cacacctctctggaccagagctccccccctcagagtaacactccgggaacgccgccctcc
tacaaactgcccccgctactggggacctacgagggcagggacgatttccctctccgcaag
actgcctcggagcccaatctgaaggtgcgttcgcggttaaaacagaaggtggctgagagg
cggagcagtcctctgctgaggaggaaggatgggacagtgataagcaccttcaaaaagaga
gccatcgagatctctgtgtcctccatgtgcagcagtgcccctggctccgggcccagctcg
cccaacagctccaacagcgccatcgcagagaacggctccagcggctctgtccctaacatc
cacgcagagcagttgcggtccctccaccagacccttaacgccgatgggacagtcagtcca
ctgagcctctacacgtccccctcactgcccaacatctccctgggtctgccagccaactcg
cacctcaccgccaatcagaagctgttgcaggaggcggagaggcaggccatccagaccatg
cggcagggtggggctctgactggcaagtttgtcagcacctcgtccctgccggcatcatgc
ctgccacctgggatgcaacacgacttagaatccccccaggcccccaacagccacagcagt
cactcctccctactgcagcacgtcctcctgctggagcaggcccgccagcagagtgccctc
ctctcagtccctatgtacggtcagtcgccgttggtgacgggggagtgggtgtccaacagt
atgcgcacggtgaacaagctgccacgccaccggcccctgagccgtacccagtctgcaccc
ctcccccagagcccccaggccctgcagcagctcgtcatgcagcagcagcaccagcacttc
ctggagaagcagaagcagtaccagctcaacaagattctgtcaaaaggggtggagcttcct
cgccagccacccacccaccccgaagagactgaggaggagctcacagagacgcaggagatg
caggaggaggggtcaggggcggggtctgagcgtctgggggaggggcgtcttcaggagcag
aggctccagaaggaagggtcgggggagacgtcgcccccctcggaacgcctgctgaccccc
ctgaagggcgagagcacagagagcgacctggaggaagaggatgatgaagatgaggccatc
gagctgagggagtgtgacgaggaaggcgtacctttcggccagcatcacctgcagcagctc
aatgttttccaggcatccctgtccatctcgggcatgccccacagacctctgggaagggcc
cagtcctcccctgccactgccagcctcaagggggcgcatatgggtgaggtccccatcaag
cacctcttcactacagggttggtgtacgacacctttatgctgaagcaccagtgtatgtgt
gggaacacccacatccacccggagcacgccggccgcatccagagtgtgtggtcccggctg
caggagacagggctgctgggccgctctgagaggattcgggggaggaaggccacgttggat
gagatccagacggtgcattcagaataccacaccctgctgtacggcaccagtcccctcaac
agacagaaactagacagcaagaagctcttaggtccaatcagtcagaagatgtacgctgtg
ttgccctgtggaggcattggggtggacagtgacactgtgtggaacgagatgcactcctcg
ggcgctgtccgaatggctgttggctgcgtcatcgagctggctttcaaagtggccgccggg
gaacttaagaatggttttgccgtggtgcgtccaccaggccatcacgctgaggaatccact
gccatgggcttctgcttcttcaactcagtggccatcacagccaagctgctaaaacagaaa
ctaggagtgggcaagatcctcatcgtggactgggatattcaccatggtaacgggacacag
caggccttttacaatgaccccaacgtgctttacatttccatgcatcgctacgacgatgga
aacttcttccccggcagtggggctcctgaagaggtgggggttggacctggtgttggattc
aacacaaacatcgcgtggacagggggcgtagaaccgcccatgggtgacgtggagtacctg
actgccttcaggacggtggtgatgcccatagccaacgagttctcccctgatgtggtccta
gtgtcggctgggtttgatgccgtggagggccatcagtcccctctgggaggatacaacgtc
actgctaaatgtttcggccacctcaccaagcagctgatgaagctggcggggggacgtgtg
gtcctggcgctggaaggaggtcacgacctcacggccatctgtgacgcttccgagtcctgc
gtggcggccctgctcggcgacgagttggaccccctgccccaggctgtcctgcaacagaag
ccctgtccaaaagctgctgcctctctggagagggtcatcgagatacagagtaaacactgg
agctctctccaaaggttggctcccacggtgggccagtccttaatggatgcccagcggaga
gagaaggacgaggccgacacggtcaccgccatggcatcgctcaccgtggatactgagcag
gctgccgcttccaccgtctccacggagactagcaggtctacagaagagccaatggaagag
gagcctgtcttgtag

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