Coregonus clupeaformis (lake whitefish): 121550954
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Entry
121550954 CDS
T08357
Name
(RefSeq) DNA-3-methyladenine glycosylase-like
KO
K03652
DNA-3-methyladenine glycosylase [EC:
3.2.2.21
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121550954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cclu03400
]
121550954
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
121550954
DNA repair and recombination proteins [BR:
cclu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
121550954
Prokaryotic type
121550954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pur_DNA_glyco
Motif
Other DBs
NCBI-GeneID:
121550954
NCBI-ProteinID:
XP_041719354
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All DBs
Position
35:9777785..9781271
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AA seq
300 aa
AA seq
DB search
MSGRKRKQISVPESEDQVNRGVSLRQLRSTVHDHESRDVNDVKPGTVKSQYFSKEGDPQR
LGEEFFNQPCISLAKSFLGKVLVRRSANGTELRGRVVETEAYLGGEDKASHSAGGKCTER
NTAMFMKPGTIYVYPIYGIYLCMNVSSQGEGAAVLLRALEPLQGLPLMRQLRGARRREGA
RPLKEKELCNGPSKLCQALDIPRCFDRRDLASDPEVWLERDPQIGPQESDLKEVVSAARI
GIDSHGEWATKPLRFYLRGHHCVSVVDKQAETQTHSMANTVISDFASSSVDVCDGGTGQS
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggcgaaagaggaagcaaatatcagtacctgagtccgaggaccaagtaaacagg
ggcgtgtcactgagacagttgaggtctaccgtccatgaccatgagagcagggatgttaat
gatgtcaaaccagggacagtgaagagtcagtacttctccaaggagggggacccccaaagg
cttggagaagagttcttcaaccagccctgtatcagtttggctaaatcattcctgggcaag
gtgttggtgcgtcggagcgcaaatggcactgagctgagagggagggtggtggagactgag
gcctacctgggaggagaggacaaagcctctcactctgctgggggaaaatgcactgagagg
aacacagcgatgtttatgaaacctggcaccatctatgtatacccaatctatggcatctac
ctctgtatgaatgtttccagtcaaggggagggtgctgccgtgctgctgcgggctctggag
cccctacagggcctgcctctaatgaggcagttgcggggagccaggcgaagggagggggcc
cggcccctgaaggaaaaggagctatgcaacggcccctcaaagctgtgccaggccctggac
ataccacgctgctttgatcggagagacctagcctcagacccagaggtgtggctggagagg
gacccccagataggaccacaggagtcagacctcaaggaggtggtctcagcagcccggatc
ggcattgactctcatggggaatgggccaccaaacccctgcgcttctatctgcgtggtcac
cactgtgtgagtgtagtggacaaacaggcagagacacagactcactcaatggccaacact
gttatatcagactttgcgtcctcctcagtggacgtatgtgatggtggcacaggacagagt
tga
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