Coregonus clupeaformis (lake whitefish): 121550956
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Entry
121550956 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: GATOR complex protein NPRL3-like
KO
K20406
nitrogen permease regulator 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
121550956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121550956
Membrane trafficking [BR:
cclu04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
121550956
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPR3
HTH_NPRL3
Motif
Other DBs
NCBI-GeneID:
121550956
NCBI-ProteinID:
XP_045066723
LinkDB
All DBs
Position
35:complement(9781753..9802350)
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AA seq
595 aa
AA seq
DB search
MRRYNMYIHSSSFELQGERKSMYKQSENSSYKSGEKTSPISVILVTSGSRGNKLLFRYPF
QRVADCPSSLTKKQRSPYALNTTGDVLEDPDGDSRFSDIILATILATKSDMCGKKFELKI
DNVRFVGHPTLLQHPHTIQVSKTDPSPKREMPTMILFSVVFALRANADPSVISCMHNLSR
RIAIALQHEERRCQYLTREAKLILAVQDEVTTMTETDGSPQSPFRQILPKCKLARDLKEA
YDSLCTIGVVRLHINNWLEVSFCLPHKIHRVGGNHVPPEALERSLKAIRPYHALLLLDSE
KALLAQLPLDCSPALVRLIKTCSAVMNLQQLAQDADLNLLQIFQIAAHLVYWGKAIIVYP
LCENNVYMLSPHANISLYSPLAEGFGQQFPGHDLPSMLAKFSLPLSLSEFRNPLDASVQE
AQLIQMVVWMLQRRLMIQLHTYACLLVPPSEEELPLVAGVGGRSLSTPSALSFGSPTSSD
DMTLNSPSMGNSSAELLPGGDSPLNKRMTETLLASLTEHERQVILNIPAAQSPEDLRMFA
RLLHYFRGHHHLEEIMYNENMRRSQLKTLFDKFRSVLVVISHEDPVISLFQSPLE
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgttacaatatgtacattcattcctcttcatttgagttacaaggggagcgaaaa
tctatgtataaacagtctgaaaatagctcctacaaaagtggtgaaaagacaagccctatc
agtgtaattttggttacttcgggtagccgagggaacaaattgctctttaggtacccattt
caacgggttgcagattgtccatcatcactcacgaaaaaacagcgaagtccatatgcattg
aacacgacaggagatgttcttgaagacccagatggagattcaaggttctctgacatcatc
ctcgccactatcttggccaccaagtctgatatgtgtgggaagaagtttgagctgaagata
gacaatgtgcgtttcgttgggcaccccaccctcctccagcatcctcacaccattcaggtg
tccaagacagacccctcacctaagagggagatgcccaccatgatcctgtttagtgtcgtg
tttgctctgagggccaatgccgacccatcagtcatcagctgcatgcacaacctgtctcgg
cgcatcgctatcgccctgcagcatgaggagcgccgctgccagtacctcaccagagaggcc
aagctgatcctggccgtgcaggacgaggtcaccaccatgaccgagactgatggcagccct
cagtcaccgttcagacaaatccttcctaaatgcaagcttgccagggacttgaaggaggca
tatgacagcctgtgtacaataggggtggtgaggctccatatcaacaactggctggaggtg
agcttctgtttgcctcacaagatccaccgggtagggggcaaccacgtacctccagaggcc
ctggagcgcagcctcaaggccataaggccgtatcatgccctccttctgctggacagtgag
aaggctctgctggcccagctgcctctggactgctctcctgctctggtgcgcctcatcaag
acctgctctgcagtcatgaacctgcagcagcttgcacaggatgcagacctgaacctgcta
cagatcttccagattgctgctcacctggtgtactggggcaaagccatcatagtgtaccct
ctatgtgagaacaatgtctacatgctgtccccacacgccaacatcagcctgtactctcca
ttggctgaagggtttggccagcagttcccaggtcatgacctgccttccatgctggccaaa
ttctccctgcccctctcactgtctgagttcaggaacccactggatgcgtctgtgcaggag
gcccagctgatccagatggtggtgtggatgctccagcggcgcctgatgatccagctccat
acctacgcgtgtctgctggtgccccccagtgaggaggagctccccctggtggccggggtg
gggggccgcagcctcagcacacccagcgcactcagcttcggatccccaaccagcagtgat
gacatgaccctgaacagtcccagtatgggaaactccagtgcagagctacttcctggtgga
gactctccactaaacaagaggatgaccgagacgttactggccagcctgacagagcacgag
cgccaggtcatcctcaacatcccagctgcacagagccctgaagacctgcgcatgttcgcc
agactgctgcactacttccgagggcaccatcaccttgaggagatcatgtataacgaaaac
atgaggcgctctcagctgaagaccctctttgacaaattcagaagtgttctggttgtcatc
agccatgaggaccctgtcatctccctcttccagtctcctctggagtag
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