Coregonus clupeaformis (lake whitefish): 121550960
Help
Entry
121550960 CDS
T08357
Name
(RefSeq) syntaxin-2 isoform X1
KO
K08486
syntaxin 1B/2/3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121550960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121550960
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121550960
Membrane trafficking [BR:
cclu04131
]
SNARE
Syntaxin (Qa)
Stx-PM
121550960
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
121550960
Exosomal proteins of other body fluids (saliva and urine)
121550960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
Prominin
TMPIT
Tlp
DUF6042
Lzipper-MIP1
DUF6262
DUF2116
T2SSF
STX6_10_61_N
DUF16
DksA_N
DUF5345
DUF3671
Motif
Other DBs
NCBI-GeneID:
121550960
NCBI-ProteinID:
XP_041719360
LinkDB
All DBs
Position
18:56760441..56770459
Genome browser
AA seq
291 aa
AA seq
DB search
MKDRLGELTASRTQAEEDVTVDRDGFMEGFFRRVEEVRGLIDKISSKVEEVRKKHSMILS
APNPDQKMKDELDRLTNEIKNNANSVRVKLKSMEQSLPKDDVSNRASVDFRIQKTQHTVL
SRKFVDVMTQYNETQVSFRERSKGRIQRQLEITGRVTSNEELEDMLESGNSSIFTSDIIS
DSQITRQALNEIESRHQDIIRLESSIRELHAMFMDMAMLVENQGDMVNNIEKNVSNAAEY
IGRAKEETKKAVRYQKKSRRKLIIFAFALLILLAVIALIVGLSVGLTKSPV
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccggttgggtgaattaaccgcaagcaggacacaggcagaggaggatgtcaca
gttgacagagatggatttatggaagggtttttcagaagggtcgaagaggttagggggttg
attgataagatatcttctaaagtggaggaggtgaggaagaagcacagcatgatcctgtct
gcacccaatccagatcagaagatgaaagatgaacttgaccggttgaccaatgagatcaaa
aacaatgccaactctgtgagagttaagctaaaatctatggagcagagcctgcccaaggat
gatgtttctaacagggcctcggttgatttccgcattcagaaaacccagcacacggtgctc
tccaggaagtttgtggatgtcatgactcagtacaacgagactcaagtgtcgtttagggag
agaagcaaaggaaggatccagagacagctggagataactgggagagtgactagcaatgag
gaactggaggacatgctggagagtggcaactcatcaatttttacatctgatattatctct
gactctcagatcacgcgccaggccttgaatgagattgagtcaaggcaccaggatatcatc
cgcctggagtccagcatcagggagctccatgccatgtttatggacatggccatgctggtg
gagaatcagggggatatggtcaacaacatagagaagaatgtctccaatgcagctgaatac
ataggccgtgccaaagaggagaccaaaaaagctgtgagataccagaaaaaatcccggagg
aaactcatcatctttgcctttgctctattgatcctgcttgctgtcattgcactaattgtt
gggctgtctgttggactaaccaaatcccctgtatga
DBGET
integrated database retrieval system