KEGG   Coregonus clupeaformis (lake whitefish): 121550960
Entry
121550960         CDS       T08357                                 
Name
(RefSeq) syntaxin-2 isoform X1
  KO
K08486  syntaxin 1B/2/3
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    121550960
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cclu04131]
    121550960
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cclu04147]
    121550960
Membrane trafficking [BR:cclu04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    121550960
Exosome [BR:cclu04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   121550960
  Exosomal proteins of other body fluids (saliva and urine)
   121550960
SSDB
Motif
Pfam: Syntaxin SNARE Syntaxin_2 Prominin TMPIT Tlp DUF6042 Lzipper-MIP1 DUF6262 DUF2116 T2SSF STX6_10_61_N DUF16 DksA_N DUF5345 DUF3671
Other DBs
NCBI-GeneID: 121550960
NCBI-ProteinID: XP_041719360
LinkDB
Position
18:56760441..56770459
AA seq 291 aa
MKDRLGELTASRTQAEEDVTVDRDGFMEGFFRRVEEVRGLIDKISSKVEEVRKKHSMILS
APNPDQKMKDELDRLTNEIKNNANSVRVKLKSMEQSLPKDDVSNRASVDFRIQKTQHTVL
SRKFVDVMTQYNETQVSFRERSKGRIQRQLEITGRVTSNEELEDMLESGNSSIFTSDIIS
DSQITRQALNEIESRHQDIIRLESSIRELHAMFMDMAMLVENQGDMVNNIEKNVSNAAEY
IGRAKEETKKAVRYQKKSRRKLIIFAFALLILLAVIALIVGLSVGLTKSPV
NT seq 876 nt   +upstreamnt  +downstreamnt
atgaaggaccggttgggtgaattaaccgcaagcaggacacaggcagaggaggatgtcaca
gttgacagagatggatttatggaagggtttttcagaagggtcgaagaggttagggggttg
attgataagatatcttctaaagtggaggaggtgaggaagaagcacagcatgatcctgtct
gcacccaatccagatcagaagatgaaagatgaacttgaccggttgaccaatgagatcaaa
aacaatgccaactctgtgagagttaagctaaaatctatggagcagagcctgcccaaggat
gatgtttctaacagggcctcggttgatttccgcattcagaaaacccagcacacggtgctc
tccaggaagtttgtggatgtcatgactcagtacaacgagactcaagtgtcgtttagggag
agaagcaaaggaaggatccagagacagctggagataactgggagagtgactagcaatgag
gaactggaggacatgctggagagtggcaactcatcaatttttacatctgatattatctct
gactctcagatcacgcgccaggccttgaatgagattgagtcaaggcaccaggatatcatc
cgcctggagtccagcatcagggagctccatgccatgtttatggacatggccatgctggtg
gagaatcagggggatatggtcaacaacatagagaagaatgtctccaatgcagctgaatac
ataggccgtgccaaagaggagaccaaaaaagctgtgagataccagaaaaaatcccggagg
aaactcatcatctttgcctttgctctattgatcctgcttgctgtcattgcactaattgtt
gggctgtctgttggactaaccaaatcccctgtatga

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