Coregonus clupeaformis (lake whitefish): 121550974
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Entry
121550974 CDS
T08357
Symbol
si:ch211-269e2.1
Name
(RefSeq) cohesin subunit SA-2 isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121550974 (si:ch211-269e2.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121550974 (si:ch211-269e2.1)
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
121550974 (si:ch211-269e2.1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd1
tRNA_bind_3
AHSP
Motif
Other DBs
NCBI-GeneID:
121550974
NCBI-ProteinID:
XP_041719390
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All DBs
Position
40:27250913..27322826
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AA seq
1189 aa
AA seq
DB search
MIAEPTVTSRSSVQNENLAVDANSSEAVNHTVGGARNENRQKSLRGKRRAREGSENAKRR
HTKVTNGSLGRAQNGHLKHGDVEAVTLFEVVTMGRSAMQAVVDDWIEAYITDRDSALLDL
ISFFIQCSGCKGLVTAEMFQSRQDDVMSKMVEELDEGSGLQYKKFLAFPWILTVTWPMDM
DSGEYPLTMSGPYWRRFRGEFCEFVSVLVTQCQYNVIFDSYLMDTLISLLTELSDSRVRA
FRHTCTLAAMKLLSSLIGVALSLSVSVENSQRLGEVERTKTSGRRNSPRLERIHRKTTEL
QDRRVEIENMMDAIFKGVFLKRYRDVLPEIRSMCMEELAVWMKLYSPVFLTDSYLKYMGW
MMHDKLPDVRLKCVLGLQGLYGDPLLLPKLDLFNSRFKDRMISMTLDKDHEVAVQTLRLL
TLISQSADDVINPEDYKQLFQLVYSSHRPLAATAGELLYTRLLSSQTQTPDLREGVSEQD
THTQLTTARVRALLHFYQDSELHQHVVYLVDSLWDCAGAMLKDWSSLTSLLLQDPSAQDE
GLSAGEQSLVVEVLVASVRQAVEGPLLAGRSTCKKVVSAREKKAQVDDCGRLTEYFLKVL
PQLLIKYSGSPETVASLLKIPQYFHPDSPNAETPQALSCLLAEMGAVVERHTDPAVLEAA
ARSYLSLCGEETAWHPLARPVRDTVVQCWADRLATLLGDALQDGNFTADEEKTGEILSTL
KKLTAFHNAQDLSRWGLFEQVSPLLSVEIMHGGLPTQLTVEALQCVCYSVLWNLNTSRET
LTSREKAVAQRSQMRALCEKCLRCLSHNDQSVKEQAFLSLCDVLTAHNYQLQVWDPSSYG
PLLYTPDPKLQRALLAFILEHVFTGAEYDSHSRSGDVESGEGRLEELHRRRSLLAGYCKL
IVHGLLEMSMAAELFKYYMKYYNNFGDIIKETLSRTRQMDKIESARTLVLCLQQLFLRLK
QEQDSGVTCSSGVQTFSSIKELARRFSLTFGWDQTKSRESLAMIHRDGIEFVFQGFVQRA
EKPSPPYLSYLTILSEFSSKLLRPDKKIVYSYLQRYVSEQTISNREECWLPLIYYRASLL
ATGAEGEDAVSFISSDTLKQPSPANRSRSPSVRHSPTADGDMRSPSALTSTDTKVRRPHK
ASSSTSPEDRKPEVELGLIVREPPPTIVISEEPSHANEELDVDTVEVAL
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagaacctacagtcacctccaggtcctcagtacagaatgagaacttggctgtg
gacgcaaactcctctgaagctgtcaatcacacagtgggcggagcccggaatgagaacaga
cagaagagtttgagagggaagaggagggcacgggagggctctgagaatgccaagcgcaga
cacaccaaggtgaccaatggcagtctgggtcgggcacagaacggacacctcaaacacggg
gacgttgaggccgtcacactgttcgaggtggtcaccatgggcaggagtgccatgcaggct
gtagttgatgattggattgaggcgtacatcacagacagagactctgccctcctggacctc
atcagcttcttcatccagtgctctggttgcaaaggtttggtgacagctgagatgttccaa
agcagacaggatgatgtcatgagcaagatggtggaggaattggatgagggttcggggctg
cagtataagaaattcctggcctttccctggatcctcacagtcacgtggcccatggacatg
gacagtggggaatatcctctcaccatgtctggtccatactggcggcggttccgtggtgag
ttctgtgagtttgtgtcggtgttggtaacccagtgtcaatacaatgtgatctttgacagc
tacctcatggacacactcatctctctgctcaccgagctgtccgactcccgcgtacgagcc
ttcagacacacctgcacattggcagcgatgaagttgctaagctctctgattggagtagcc
cttagtctgagtgtgagtgttgagaacagccagagactgggcgaggtggagagaaccaag
acatcaggaagacgcaactcaccaagactggagagaatacacagaaagaccacagagctg
caggatagaagggtggagatagaaaacatgatggatgccatattcaaaggagtcttcctg
aagagataccgggatgtgctcccagagatccggtccatgtgtatggaggagctggctgta
tggatgaaactttacagtccagtgtttctgaccgacagctacctcaaatacatgggctgg
atgatgcatgacaagctgcctgacgtgcgtctgaagtgtgtgttggggctacagggtctg
tacggagacccgctcctcctgcccaaactagacctcttcaacagccgcttcaaggacagg
atgatctctatgactctggataaggaccacgaggtggcagtacagaccctgagactactc
acactcatctcccagtcagctgatgatgttattaatcctgaggactataagcagctgttc
cagttggtgtactcctcacatcgccccctggctgccaccgcaggagagctgctctacaca
aggctgctcagctcccaaactcagacacctgacctcagagagggggtgagtgagcaggac
acacacacacagctgacgacagccagagtgagggctctgctgcacttctaccaggacagt
gagctccatcagcatgtagtatacctggtggacagtctgtgggactgtgctggtgccatg
ctgaaagactggtcgtctcttacctctttactgctacaggacccctccgctcaggatgaa
ggtctgagtgctggagagcagtctctggttgtagaggtattggtggcatcagtacgtcag
gcagtagagggacccctgctggccggaaggagcacatgcaagaaggtggtaagtgccaga
gaaaaaaaggctcaggtagatgactgtggcaggctcactgaatacttcctcaaggtactg
ccacagttactgattaagtattcagggagccctgaaactgtggcatcccttttgaagata
cctcagtactttcacccagactcacctaatgcagaaaccccacaggcgttgtcgtgcctg
ctggctgagatgggagctgttgtggagcgccacactgaccctgcggtgctggaggcggct
gcccgctcatacctcagcctgtgtggggaggaaacagcctggcaccccctggcacgacca
gtcagggacacagtggtccaatgctgggcagacagactggcaacactgctgggagacgca
ctgcaggatggcaacttcactgctgatgaggaaaaaacaggagagattctatccacgctg
aagaaactcactgcattccacaatgcccaggacctgtctcgttggggactgtttgagcag
gtctctcctcttctctcagtagagatcatgcatggtggattacctacacagctgacagtg
gaggccctgcagtgtgtatgttactctgtcctctggaacctcaacaccagcagagaaacc
ctgacctcacgggaaaaggctgtagcccagaggagtcagatgagagcattgtgtgagaag
tgtctacgttgcctgtcccacaacgatcagagtgtgaaggagcaggcattcctgtctctg
tgtgatgtcctgacggcccacaactaccagttgcaggtgtgggatccctcgtcttacgga
cccctgctctacactcccgacccaaaacttcagagggcgctgctcgccttcattctggag
cacgtcttcactggagcagaatacgacagccacagcaggagtggtgatgtagagtctggt
gaggggaggttggaggagctccacagacgtaggagcttattggcaggctactgtaaactc
atagtacacggactgctggagatgagtatggctgctgagctcttcaagtattacatgaag
tattataacaactttggtgacataattaaggagactctgagcagaacgcggcaaatggat
aagatagagagtgctcgcacgttggtgctctgtctgcaacagttgttcctgcgtctgaag
caggagcaggacagtggagtcacatgtagctcaggtgtccaaacattcagcagcatcaag
gagctggccagacgtttctctctcacattcggctgggaccagaccaagtccagagagtcc
cttgctatgatccatagggatggtatagagtttgtttttcagggctttgtccagagagca
gagaagccctcacctccctacctctcctacctcaccatcctcagcgagttctccagcaag
ctcctcagaccagacaagaagattgtttactcctacctacagaggtacgtaagtgaacag
accatcagtaacagagaagagtgttggctgccactcatctattaccgagcctccttattg
gctactggggctgagggggaggatgctgtgtccttcatcagctctgatacgctaaagcag
ccgtctccagccaatcgctcacgctctccctctgtcagacacagccctactgctgacgga
gacatgaggtccccgtctgctctcacctctactgacaccaaagtaaggaggccccataaa
gccagcagcagcacaagcccagaggacaggaagccagaggttgagcttggtctcatcgtc
agggaacccccgccgaccatagtgatatcagaggagccgtcccacgctaatgaggaattg
gatgtggacaccgtggaggttgccctgtga
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