Coregonus clupeaformis (lake whitefish): 121551005
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Entry
121551005 CDS
T08357
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit isoform X1
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121551005
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cclu01007
]
121551005
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cclu03016
]
121551005
Enzymes [BR:
cclu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
121551005
Amino acid related enzymes [BR:
cclu01007
]
Aminoacyl-tRNA synthetase
Class II (U)
121551005
Transfer RNA biogenesis [BR:
cclu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
121551005
Prokaryotic type
121551005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD1
PheRS_DBD3
PheRS_DBD2
tRNA_synthFbeta
tRNA-synt_2
HTH_11
MarR_2
tRNA-synt_2b
ARM_FBXO47
Motif
Other DBs
NCBI-GeneID:
121551005
NCBI-ProteinID:
XP_041719440
LinkDB
All DBs
Position
Unknown
AA seq
497 aa
AA seq
DB search
MADTGLVETLLRRVEKVDGGVDSQDVATSLGVDHQAIVGAVKSLQALGDVISAEQRSSKH
WELTGEGCEIAEQGSHEARVVSSIPEEGMPQSQLMKLAFGKVGFSKAMSNKWIRLDKGHE
GGPRIFKTVESLEDLVRDKLLLVQKGQASQLEEKEKNELKKRKLLSEVTVKSYWITKGSC
FSTTITKQETELTPEMIASGSWKEKKFKPYNFEAMGVAPDCGHLHPLMKVRTQFRQIFLE
MGFTEMPTNNFIESSFWNFDSLFQPQQHPARDQHDTFFLSDPAQAHEFPQDYLERVRKVH
SEGGFGSQGYKYDWKIEEAQKNILRTHTTAVSARMLYKLAQQEKFTPVKYFSIDRVFRNE
TLDATHLAEFHQIEGVVADYGLTLGDLMGILHQFFNKLGITKLRFKPAYNPYTEPSMEVF
SYHEGLKKWVELGNSGVFRPEMLLPMGLPEGVTVIAWGLSLERPTMIKYGINNIRELVGH
KVNLQMVYDSPVCRLDS
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggctgacactggtcttgtagaaacacttcttcggcgggtggaaaaggtggacggtggt
gtcgacagtcaggatgttgcgaccagtcttggggtggaccaccaagccatcgtcggggct
gtgaagagcctacaggcacttggtgatgttatctcagctgagcagcgctcctcgaagcac
tgggagctgactggggaaggctgtgagatagccgagcagggcagccatgaggcccgagtc
gtcagctccatcccagaggaagggatgcctcagagccagctcatgaaattagcctttggg
aaggtgggtttcagcaaggccatgtccaacaagtggatccgtctggacaagggccacgag
ggcggacccaggatcttcaagactgtggagagcttagaggacttggtgagggacaagttg
ctcctggtacagaaaggccaggcgtctcaactggaggagaaggagaagaatgagctgaag
aaacgcaaactgctctctgaagtgacggtcaagtcgtactggatcactaagggcagctgt
ttcagcaccaccatcaccaagcaggagacagagctcaccccagagatgatcgctagtggg
agctggaaggagaagaagttcaagccttataactttgaggccatgggtgtggccccagac
tgtggccacctgcatccgctcatgaaggtccgcacgcagttcagacagatcttcctggag
atgggcttcactgagatgcccaccaacaacttcattgagagctccttctggaactttgac
tccctgttccagccccagcagcacccggccagagaccaacacgacaccttcttcctgtct
gacccagctcaggcccatgagtttccccaggactacctggagagagtgaggaaggtccat
tcagagggaggctttggatcacaggggtacaagtatgactggaagattgaggaggctcag
aagaacatcctccgtactcacaccacagcagtcagcgctcgcatgctgtacaaactcgct
cagcaggaaaagttcacccctgtcaagtacttctccatcgacagagtgttccgtaatgaa
actctggacgccacccacttggcagagtttcaccagattgagggagtggtggccgattat
ggccttaccctgggtgacctcatgggcatccttcatcagttcttcaataaactaggaatc
accaaattacgcttcaaacctgcctacaatccatacaccgagccgagcatggaagtgttc
agctatcatgaagggctgaagaagtgggtggagctggggaactctggggtgttcaggcca
gagatgctgctgcctatggggctccctgagggggtgacggtcattgcctgggggctgtct
ctggagaggcccaccatgatcaagtatggtatcaacaacatccgtgagctggtgggacac
aaggtcaacctacagatggtctacgacagccctgtgtgtcgactggactcttag
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