Coregonus clupeaformis (lake whitefish): 121551040
Help
Entry
121551040 CDS
T08357
Symbol
sox10
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor SOX-10
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121551040 (sox10)
Transcription factors [BR:
cclu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
121551040 (sox10)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sox_N
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
121551040
NCBI-ProteinID:
XP_041719499
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MSPGVSDDGHSLSPGQSSSAAGGGDSPLSVPQPQLTGVATTTLSDVAGGISIKSDEDDDR
FPIGIREAVSQVLNGYDWTLVPMPVRVNSGSKSKPHVKRPMNAFMVWAQAARRKLADQYP
HLHNAELSKTLGKLWRLLNESDKKPFIEEAERLRKQHKKDYPEYKYQPRRRKNGKPGSGS
DADGHSEGEVSHSQSHYKSLHLDVAAHVGGAGSPLADGHHPHAAGQSHSPPTPPTTPKTE
LQSGKLGDGKREGSGAGGSRGGMGVGAEGGSGSGSGKPHIDFGNVDIGEISHEVMANMEP
FDVNEFDQYLPPNGHPGVGQSAVSGSASSSPYAYGISSALAAASGHSAAWLSKQHQQHHA
SSLGSDHSKAQIKSEAGSXGHFAEASSGSSHVTYTPLSLPHYSSAFPSLASRAQFAEYAD
HQASGSYYAHSSQASGLYSAFSYMGPSQRPLYTAITDPSSVPQSHSPTHWEQPVYTTLSR
P
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgagtccgggggtctcggacgacggtcactccttgtcaccgggtcaatcctctagtgcc
gcaggcggaggagattcgcccctgtccgttccgcagccccagctgacaggggtcgcgacg
acgaccctatccgatgtagctggtgggatttccatcaagtccgacgaagacgacgatcgc
tttcccattggtatccgcgaggcagtgagccaggtgctgaacggctacgactggacactc
gtgcctatgcctgtgcgcgtaaactccggcagcaaaagcaagccgcatgtgaaaagacct
atgaacgccttcatggtgtgggcacaggccgcacggagaaaactggcagaccagtatccc
cacctccacaacgctgagctcagcaaaaccctcgggaaactttggaggctcttgaatgag
agtgataagaagcctttcatcgaggaggcagagaggctgaggaagcagcacaagaaggat
tacccggagtacaagtaccagccacgccgccgcaagaacggcaaacccggctcgggctct
gatgctgacggccactcggagggtgaggtcagccatagccaatcgcactacaagagcctc
cacctggacgtggctgcccacgtcgggggggcggggtctcctctggctgatggacaccac
ccacatgctgcaggccagagccacagccctcctacaccacccaccacccccaagacggaa
ctccagtctgggaagttgggtgatgggaagcgggagggcagtggagcggggggctcccgt
gggggaatgggggtaggagcggagggtggctctggatcagggtcaggcaaaccccacatt
gatttcggcaacgtggacatcggtgagatcagccacgaggtgatggccaacatggagccc
tttgatgtgaacgagtttgaccagtacctgccccccaacgggcacccgggggttggacag
agtgctgtcagcggcagcgcctcgtcctctccctatgcctacggtatctcctctgccctg
gccgcggccagtggacactctgcagcgtggctatccaagcagcaccagcagcatcatgcc
tcctctctgggctccgaccactccaaggcccagattaagagtgaggccggctcgnnggga
cactttgccgaagcatcctcagggagttcccatgtcacctacactcccctcagcctgccc
cactacagctctgctttcccctcgctggcctccagggcccagtttgcagagtatgctgac
caccaggcctcgggatcctactacgcccactccagccaggcctcagggctgtactctgca
ttctcctacatggggccctcgcagaggcccctgtacacagccatcactgacccgtccagc
gtgccacagtcacacagccccacacactgggagcagcctgtctacaccaccctgtcgcgg
ccctga
DBGET
integrated database retrieval system
