Coregonus clupeaformis (lake whitefish): 121551041
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Entry
121551041 CDS
T08357
Name
(RefSeq) transcription activator BRG1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121551041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
121551041
03036 Chromosome and associated proteins [BR:
cclu03036
]
121551041
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121551041
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
121551041
Chromatin remodeling factors
BAF complex
121551041
PBAF complex
121551041
GBAF(ncBAF) complex
121551041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
121551041
NCBI-ProteinID:
XP_041719500
LinkDB
All DBs
Position
Unknown
AA seq
1641 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGAMMGPSPSPGSAHSMMGPSPGPPASGHPHPQQGPS
GYPQENMHQMHKPMEGMHEKGMPDDPRYGPMKGMGMRPGGGHIGMGPPPSPMDQHSQGYP
SPLGGSEHSPSPVPANGPPPGPMMPSGPGGVPMEGSDPQAMGQQNRGGVPGPSGVSGPGG
VGPGGPTPFNQNQLHQLRAQIMAYKMLARSQPLPDHLQMAVQGKRPMPGMQQPGMPNMPP
SSGPGAGPGAGPGQPPAHYNRPLGMVGPNMPPPGPSGVPPGMQGQPTNGPPKQWPEGPMV
NAAAPSSAPQKLIPPQPTGRPSPAPPSVPPAASPVMPPQTQSPGQPSQPPPMVLHQKQNR
ITPIQKPRGLDPVEILQEREYRLQARITHRIQELEHLPGSLAGDLRTKANIELKALRLLN
FQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQK
HQEYLNSILQHAKDFKEYHRSITAKLQKATKAVATYHANTEREQKKENERIEKERMRRLM
AEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTDLVRAHKADQALKDKKKKKKKKKKKK
PESAEGQPPALGPDGEPLDETSQMSDLPVKVIHVDSGKILTGLDAPRAGQLDTWLEMNPG
YEVAPRSDSEDSGSEEEEEEEEEPQPSQAPTEEKKKIPDPDTEDVSEVDVRYIIEGAKQD
VDDEYNSAEAAFARGLQSYYAVAHAVTETVDKQSTLLVNGQLKHYQIKGLEWLVSLYNNN
LNGILADEMGLGKTIQTIGLITYLMEHKRINGPFLIIVPLSTLSNWVYEFDKWAPTVVKV
SYKGSPQARRAFLPILRSGKFNVLLTTYEYIIKDKQVLAKLRWKYMIVDEGHRMKNHHCK
LTVVLNTHYLAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCTTFEQWFNAPFAMTGE
KVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQRVLYRHMQ
AKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQQIEESFSEHLGFTGGVVSG
PDLYRAAGKFELLDRILPKLRVTNHKVLLFCQMTSTMTIMEDYFGWRNFKYLRLDGTTKA
EDRGMLLKTFNDPASQYFVFLLSTRAGGLGLNLQSADTVVIFDSDWNPHQDLQAQDRAHR
IGQRNEVRVLRLCTVQSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILE
HEEQDEVGAPGGWRAGGALEEDEVPDDETVNQMIARSEEEFDQFMRMDLDRRREDARNPK
RKPRLMEDDELPTWIIKDDAEVERLTCEEEEEKIFGRGSRQRKEVDYSDSLTEKQWLKAI
EDGNLEDLEEEVRHKKTTRKRKRDRDDMPGPATPSSSGGGGGRSRDKDEEVKKAKKRGRP
PAEKLSPNPPSLTKKMKKVVDTVIKYKDGSNGRQLSEVFIQLPSRKELPEYYELIRKPVD
FRKIKERIRNHKYRSLNDLEKDVMLLCSNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEK
EKEEESEGEDSEEDEEEVDEGSESESRSVKVKIKLGRKEKEGRGKGQRRRGRGSRAKPVV
SDDDSEEEQEEAGSASGSEED
NT seq
4926 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccggacccccccatgggagggacgccccggccgggcccctccccaggacca
gggccttctccaggagccatgatgggccccagcccttccccgggctctgctcatagcatg
atgggacccagcccaggtcccccagcctctggacacccccaccctcaacaggggccctca
ggatatcctcaggagaacatgcaccagatgcacaaacctatggaaggcatgcatgagaag
ggcatgcctgacgaccctcgctacggaccgatgaagggcatgggaatgagaccaggtgga
ggccacatcggaatgggaccccctcctagccccatggaccaacattcccaaggctacccc
tctccactggggggttctgagcactctcccagccctgtgccagccaatggccctcccccc
ggccccatgatgccctccggcccaggaggtgtccccatggagggcagtgacccccaggcc
atgggccagcagaaccgcggtggtgtcccaggtccgagtggtgtttctgggccaggcggg
gttggtccgggtggacccacccccttcaaccaaaaccagctgcaccagctcagggcccag
atcatggcctacaagatgctggctcgcagccagcccctgccagaccacctgcagatggcc
gtgcagggcaagaggcccatgccagggatgcagcagccagggatgcccaatatgccccct
tcctctgggcccggagcagggcctggggcggggcccggacagccaccagcacactacaac
agacctcttggaatggtaggccccaacatgcctcctccaggaccctcaggtgttccccct
ggtatgcagggccagcccaccaacggaccccctaaacaatggcccgaagggcccatggtg
aatgctgctgctccatccagtgccccccagaagctgattccccctcagcccactggcaga
ccctcccctgctcccccctccgtgcccccggctgcctccccggtcatgccccctcagacc
cagtcccctgggcagccctcccagcccccacccatggtgctgcaccagaaacagaaccgc
atcacacccatccagaagccccgtggcctggacccagtggagatcctccaggagagagag
tacaggctgcaggctcgtatcacccaccgtatccaggagctggagcatctaccagggtct
ctggccggagacctgcgcaccaaagccaacatcgagctcaaagccttgaggctgctaaat
ttccagagacagctgcgtcaggaggtggtggtttgtatgcgtcgtgacacggccctggag
acagccctcaacgctaaggcctacaagcgcagcaagcgccagtccctccgcgaggcccgc
atcacagagaaactggagaagcaacagaagatcgaacaggagcgcaaacgacgacagaaa
caccaggaataccttaacagcatcctgcagcatgctaaagacttcaaggagtaccaccgc
tccatcacagccaagctccagaaggccaccaaagccgtggccacgtaccacgccaacact
gagcgcgagcagaagaaagagaacgagcgcattgagaaggagaggatgaggaggctgatg
gctgaagatgaggagggctaccgtaaactcattgaccagaagaaagacaagcgtctggcc
taccttctgcagcagacggacgagtatgtggccaacctcaccgatctggtcagagcccac
aaggctgatcaggccctcaaggacaagaagaaaaagaagaagaagaagaaaaagaagaag
ccagagagtgcagagggccagcctcctgccctgggacccgatggagagcctctggatgag
accagtcagatgagtgacctacctgtgaaggtgatccatgtagacagtgggaagatcctg
acgggtctggatgcaccccgggctggccagctggacacctggctggagatgaaccctggg
tatgaagtggctcctcgttcagacagtgaggacagtggctcagaggaagaggaggaggaa
gaggaggagccccagccctcccaggctcccaccgaggagaaaaagaagataccagaccct
gacacagaggacgtgtccgaggtcgacgtccgctacatcatcgagggagccaagcaggat
gtggatgatgagtataacagtgcagaggcggcgttcgcccgaggtctgcagtcttactac
gctgtggcccacgccgtcactgagacggtggacaaacagtccacactgctggtcaacggg
cagctcaaacattaccagatcaagggcttggagtggctggtgtctctctacaacaacaac
ctgaacgggatcctggctgatgagatgggtctgggcaagaccatccagaccatcggcctc
atcacctacctcatggagcacaagcgcatcaacggccccttcctcatcatcgtgcccctt
tcgactctgtccaactgggtgtacgagtttgataagtgggctccaactgtggtaaaagtc
tcttacaaaggctctccacaagctcgccgcgcattcctacccatcctgcgcagtggcaag
ttcaacgtgctgctcaccacctacgagtacatcatcaaagacaagcaagtgctggctaag
ctgcgctggaagtacatgatagtggacgagggccaccgtatgaaaaaccaccactgtaag
ctgactgtggttctgaacacccactacctggccccgcggcgtcttctgctgaccggcacc
ccgctgcagaacaagctgccggagctctgggctctgctcaacttcctgctgccgaccatc
ttcaagtcctgcacaaccttcgagcagtggttcaatgcccccttcgccatgaccggagag
aaggtggatctgaacgaggaagagaccatcctgattatccgtcgtttgcacaaagtgctc
cgccccttcctgctgcgcagactgaagaaggaagtggagtcccagctgcctgagaaggtg
gagtatgtgatcaagtgtgacatgtcggccctgcagagagtgctgtacagacacatgcag
gctaagggagtgctgctcaccgacggctctgagaaagacaagaagggtaaaggaggcacg
aagaccctgatgaacaccatcatgcagctgaggaagatctgtaaccatccctacatgttc
cagcagatcgaggagtccttctctgagcatttgggattcactggaggcgtagtgtcggga
cctgacctgtaccgcgccgctgggaagtttgagctgctagaccgtatcctgcccaagctg
agggtcaccaaccacaaggtcctgctcttctgtcagatgacttccaccatgaccatcatg
gaggactactttggctggcgcaactttaagtacctgcgtctggacggaaccaccaaggct
gaggatcgtgggatgcttttgaagaccttcaatgacccagcctctcagtactttgtgttc
ctgctcagcaccagggccggagggctgggcctcaacctgcagtctgctgacaccgtggtc
atctttgactcagactggaacccacatcaggacctgcaggcccaggacagagcccaccgt
attgggcagcggaacgaggtgcgtgtgttgcgtctctgcaccgttcaaagtgtggaggag
aagatcctggcggcagccaagtacaagctgaacgtggaccagaaggtcatccaggccggc
atgttcgaccagaagtcgtcaagtcacgagcgccgtgccttcctgcaggccatcctggag
catgaggaacaggacgaggtcggggccccggggggctggcgcgctgggggggcgttggag
gaggacgaggtgcctgatgacgagaccgtcaaccagatgattgccaggagcgaggaggag
tttgaccagttcatgcgaatggacctggaccggcgccgtgaggacgcccgcaaccccaag
aggaagccccgtttgatggaggatgacgagctgcccacctggatcataaaggatgatgcc
gaggtggagaggctcacctgtgaggaggaggaggagaagatatttggtcgcggctctcgc
cagcgcaaggaggtggactacagcgactcactcacagagaagcagtggctcaaggccata
gaggacggtaatctggaggacctggaggaggaggtgcgtcacaagaagacgacccggaag
cgcaagcgagaccgtgacgacatgcccggccctgccacacccagctccagtggtggtggc
ggcggtcgcagccgtgacaaggacgaagaggtcaagaaggccaagaaacgcggacgcccc
ccagctgaaaaactgtcccctaaccccccctccctcaccaagaagatgaagaaggtggtg
gacactgtcatcaagtacaaggacggaagcaatgggcgccagctgagtgaagtcttcatc
cagctgccctcccgcaaggagctgcccgagtactacgagctcatccgcaagcctgttgac
ttcaggaagattaaggagaggatccgcaaccataagtaccgcagcctgaatgacctggag
aaggatgtgatgctgctttgtagcaatgcccagaccttcaacctggagggctctctgatc
tatgaggactccatcgtgctgcagtcagtctttaccagcgtcaggcagaagatcgaaaag
gagaaggaggaggagagcgagggagaggacagtgaggaagatgaggaggaggtggacgaa
ggctctgagtctgaatctcgttcagtgaaggtgaagataaagctggggaggaaggagaag
gagggcagagggaagggccagcgccggaggggccgtggctcccgggccaaacctgtggtg
agcgatgacgacagcgaggaggaacaggaagaggcgggttcggccagcggcagtgaggag
gactga
DBGET
integrated database retrieval system