Coregonus clupeaformis (lake whitefish): 121551066
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Entry
121551066 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04120
Ubiquitin mediated proteolysis
cclu04137
Mitophagy - animal
cclu04144
Endocytosis
cclu04340
Hedgehog signaling pathway
cclu04350
TGF-beta signaling pathway
cclu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121551066
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
121551066
04350 TGF-beta signaling pathway
121551066
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121551066
04137 Mitophagy - animal
121551066
09144 Cellular community - eukaryotes
04520 Adherens junction
121551066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121551066
04121 Ubiquitin system [BR:
cclu04121
]
121551066
03029 Mitochondrial biogenesis [BR:
cclu03029
]
121551066
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
121551066
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
121551066
Autophagy
Mitophagy
Other mitophagy associated proteins
121551066
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
HECT type E3
121551066
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
121551066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
121551066
NCBI-ProteinID:
XP_041719527
LinkDB
All DBs
Position
Unknown
AA seq
772 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLVKKDFFRLPDPFAKVVVDGSGQCHSTDTVKNTLDPK
WNQHYDLYIGKCDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDMNKL
GPNDSDTVRGQIVVSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNHIT
RTTQWERPTRPASEYSSPGRPLSCIVDENTPILSTNGATPTIPCVPSSDQRAQERRVRSQ
RHRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEEL
GPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPSPNGSRSGIEIQNSPI
SRQNQLKEQVHQALVSPGNLPEEAECLTVPKYKRDLVQKLKILRQELSQQQPQAGHCRME
VSREEIFEESYRQVMKMRPKDLWKRLMVKFKGEEGLDYGGVAREWLYLLSHEMLNPYYGL
FQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKP
ITLDDMESVDPDLHNSLVWILDNDITGVLDHTFCVEHNAYGEIIQHELKPNGKIIQVTQD
TKKEYVRLYVNWRFLRGIEAQFLALQKGFNEVISQHLLKAFDEKELELIVCGLGKIDIND
WKSNTRLKHCTPDTNIVKWFWKAVESYDEERRARLLQFVTGSSRVPLQGFKALQGAAGPR
LFTIHQIDASSNNLPKAHTCFNRIDIPPYEHYDKLYDKLLTAIEETCGFAVE
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaccaaggagttcggcgaaatggtccggttaagctgcgtttaacagtcctctgc
gccaaaaacctggtgaagaaagatttctttcgcctccctgatccctttgccaaagtggtg
gtggacggctcaggacaatgtcactccacagacaccgtgaagaacaccctcgaccccaag
tggaaccagcactacgacctatatattggcaagtgtgactccatcaccatcagcgtgtgg
aaccacaagaagatccataagaagcagggggctggcttcctgggctgtgtacgccttctg
tccaacgccatcaaccgcctcaaagacaccggctatcagagattggacatgaacaagctg
ggccccaatgacagtgacacagtgaggggtcagatagtggtgagcctgcagtccagagac
cggataggtacaggaggcccagtggtggactgcagccgtctgtttgacaatgacctgcca
gacggctgggaggagcggaggactgcgtctggccgaatccagtacttgaaccacatcaca
cgtaccacacagtgggagaggcctaccaggcctgcgtcggagtactccagcccgggccgg
cctctcagctgcatcgtggatgagaacacgcccatcctgagcaccaacggggccacaccc
accatcccgtgtgtcccgtccagcgaccagcgggcccaggagagacgcgtccgctcccag
agacacaggaactacatgagcaggacacacctccacacgcccccagacctgcctgaggga
tacgagcagaggaccacgcagcagggccaggtgtacttcctccacacccagacaggagtc
agcacatggcatgaccctcgagtacccagagacctgagtaatgtaaactgtgaggagctg
ggcccactgcccccgggctgggagatcaggaacacagccaccggccgggtctactttgtg
gaccacaacaaccgcaccacgcagttcacagacccgcgcctctccgccaacctgcatcta
gtcctcaacccaagccccaatggttcccgtagcggcatcgaaattcagaatagtccgatc
agccgtcagaaccagctgaaggagcaggtccatcaggcactggtgtctccaggtaatctg
ccagaggaggccgagtgcctcacggtgcccaagtacaagagggacctggtgcagaagctg
aagatccttcgccaggagctgtcccagcagcagccccaggcaggtcactgccgcatggag
gtgtcccgcgaggagatctttgaggagtcttaccgccaggtgatgaagatgaggccgaag
gacctgtggaagagactgatggtgaagtttaaaggggaggaggggctggactacggagga
gtggccagggagtggctgtatctgctgtcccatgagatgctgaatccgtactacggcctg
ttccagtactcccgcgatgacatctacaccctgcagattaaccccgactcggccgtcaac
ccggagcacctgtcctacttccactttgtgggtcgtattatgggcatggcggtgttccac
ggccactacatagacgggggcttcaccctgcccttctacaaacagctgctggggaaaccc
atcaccctggacgacatggagtcagtcgacccagacctccacaacagcctcgtctggatc
ctggacaatgacatcacaggggtgttggaccacaccttctgtgtggagcacaatgcctac
ggggagatcatccagcacgaactcaaacccaatggcaaaatcatccaggtcacccaggac
accaagaaggagtatgtcagactgtatgtgaactggcgtttcctgcgaggcatcgaggct
cagttcctggccctgcagaagggcttcaacgaggtcatctcccagcacctcctcaaggcc
ttcgacgagaaagagctggagctcatagtatgtggcctgggtaagatcgacatcaacgac
tggaagtccaacacgcggctgaagcactgcacccccgacaccaacatcgtcaagtggttc
tggaaggccgtggagtcgtacgatgaggagcgccgggccaggttgctgcagtttgtcacc
ggctcctccagggtccctctgcaaggcttcaaagccctccaaggtgctgcaggcccacga
ctcttcaccatccaccagatcgatgccagctccaacaacctgcccaaagcccacacctgc
ttcaaccggatcgatattcctccctacgagcactatgacaagctgtatgacaagctgctc
actgcaatcgaggagacgtgtggctttgctgtggagtga
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integrated database retrieval system
