Coregonus clupeaformis (lake whitefish): 121551185
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Entry
121551185 CDS
T08357
Name
(RefSeq) steroidogenic factor 1 isoform X1
KO
K08027
nuclear receptor subfamily 5 group A member 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121551185
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cclu03310
]
121551185
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 Fushi tarazu-F1-like
121551185
Nuclear receptors [BR:
cclu03310
]
5. Fushi tarazu-F1 like
5A. Fushi tarazu-F1 like receptor
121551185
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121551185
NCBI-ProteinID:
XP_041719667
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Position
18:16811792..16830973
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AA seq
494 aa
AA seq
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MINRIKHLEEGDNKGVPLKVMDYTYDADLEELCPVCGDKVSGYHYGLLTCESCKGFFKRT
VQNNKRYTCAENQECKIDKTQRKRCPFCRFQKCLNVGMRLEAVRADRMRGGRNKFGPMYK
RDRAMKQQKKALIRSTGFKLESAPPQLSPVQTNYGFTGTLHSLPSLPKGLMPSIPASNNA
TDYEASLYGPPSLGVAMQPHGPLPTQYQYTAFPSRAIKSEYPDHYTSSPESLVGYPLPDV
YPTGGSPQAPSLPPLVLELLRCDPDEMQVQSKIMAFLQQEQSGRGRQEKLSTFSLMCRMA
DQTLFSIVEWARSCIFFKELKVGDQMKLLHNSWSELLVLDHVFRQVQHGKESNLLLVTGQ
EMDLSSMGSQAGVTLSGLVQRGQELAGRLLTLQVDRREVACLKFLLLFNPNVKLLENQAF
VESVQEQVNGALLEYTLCTYPLYLDKFSQLVLRLPELRALSTQAEDYLCYKHLSGEVPCN
NLLIEMLHAKRACV
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgattaataggattaagcacttggaagaaggggacaataaaggcgtccctttgaaagta
atggactacacctatgatgcagatttggaagaattgtgtcctgtttgtggagataaggtc
tcaggataccactatggactccttacatgtgaaagttgtaagggcttcttcaagaggaca
gtccagaacaataagaggtacacttgtgcagaaaaccaggagtgtaaaatagacaaaaca
cagcggaagagatgtcccttctgccgattccagaaatgcctcaatgttggcatgagatta
gaagcggtgcgtgcagaccgcatgcgtgggggcaggaataagtttggccccatgtacaag
cgggatagagccatgaagcagcagaagaaggctttgatccgttccacaggcttcaagctg
gagtctgctcctccacagctctcccctgtacagactaactatggcttcaccggcaccctg
cacagcctcccctccctccccaaagggctcatgccctccatcccagcctccaacaatgcc
acagactacgaggccagcctctacggacccccctccctgggggtggccatgcagccccat
ggacccctgcccacccagtaccagtacacagcattccccagtagggccatcaagtctgag
taccctgaccactacacaagctccccagagtctctggtggggtaccccttaccggacgtg
taccccaccggtggctccccgcaggctcccagcctgcccccccttgtgctggagctgctg
cgttgcgacccagacgagatgcaggtgcagagtaagattatggccttcctgcagcaggag
cagagtggccggggccggcaggaaaagctcagcaccttcagcctcatgtgtcgcatggca
gaccagactctgttctccatagtggagtgggccaggagctgcatcttcttcaaggagctc
aaggtgggggatcagatgaagcttcttcacaacagttggtctgagctgctggtcctggac
catgtcttcagacaagtgcagcatgggaaggagagcaacctgctcttggttactggccag
gagatggatctgtcatccatggggtcccaggcaggggtgactctttcaggcctggtccag
agaggacaggagttggctgggaggctgctgaccctgcaggtggacaggagagaggttgcc
tgccttaagttcctcctcctcttcaatcccaatgtaaagctgttggagaatcaagcgttt
gtggagagtgttcaggagcaggtgaatggggctctgctggagtacactctgtgcacctac
cccttgtacctggacaagttcagccagctggtgctgcgtctgccagagctgcgagccctc
agcacccaggcagaggactacctgtgctacaaacacctgagtggggaggtgccctgcaac
aacctgctcatcgagatgctgcatgccaagagggcctgtgtatga
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