KEGG   Coregonus clupeaformis (lake whitefish): 121551198
Entry
121551198         CDS       T08357                                 
Name
(RefSeq) integrin alpha-IIb
  KO
K06476  integrin alpha 2B
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04510  Focal adhesion
cclu04512  ECM-receptor interaction
cclu04810  Regulation of actin cytoskeleton
cclu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    121551198
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    121551198
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    121551198
   04810 Regulation of actin cytoskeleton
    121551198
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cclu01009]
    121551198
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cclu04147]
    121551198
   04515 Cell adhesion molecules [BR:cclu04515]
    121551198
   04090 CD molecules [BR:cclu04090]
    121551198
Protein phosphatases and associated proteins [BR:cclu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     121551198
Exosome [BR:cclu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121551198
Cell adhesion molecules [BR:cclu04515]
 Integrins
  Integrin alpha subunits
   121551198
CD molecules [BR:cclu04090]
 Proteins
  121551198
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 Integrin_alpha PH1_SSRP1-like TM_ErbB1
Other DBs
NCBI-GeneID: 121551198
NCBI-ProteinID: XP_041719678
LinkDB
Position
35:11643314..11671041
AA seq 1056 aa
MEEHRIHISIQMMGLMLFALPHYSDTLNLNLVNFTEFSGPEGSFFGFSADFYQFSNNTIS
VVVGAPRANTSQPGVTEAGAVYLCPWAQTGGACTTMTFDTKGDEVYPHQNLVIRSSKSHQ
WFGATVRSSGNYIVACAPLFHWNVIDVGERDEAQNTPVGNCLVLNTLTGKTVDFSPCKEV
MTEKVYKALKYNNDRRYCEVGFSSDITKEGRLLIGAPGGYYFQGQIISAGLLDIVNSAKR
QNAKPYVAGQTHSPETGGYDRYHGYSVATGEFTGDSIPDYVAGVPNDRNTAGTVKIYDGN
SIDFLGVKHRFLGSQVASYFGHSVAVTDINNDGRDDILIGAPLFMERVSGQQLQEVGQVS
VYLQRERSTFHSKPDQKLTGSQVYGRFGSTIAPLGDLDKDGFNDVAVGAPSSGIEGRVFI
YMGTSDGLSPQYTQVIESPFQSLGSPAQFGFTLRGAIDIDSNGYPDLIVGAWGVNKIAVY
RAQAVVMAKTQLSLYPDFLNPDVKECEHPTTNEPVACFTVMMCISVSGHSIPEEIVLDAE
LQLDKMKQPMARRTLLLQTNLPQEYFQLTIQRDVGVVCRNQTAYLRHESEFKDKLSPIFI
SLNYSLSNSISQEAMLHGQRAVVTQTRIILDCGEDNICVPDLRLTAEAGTDRLLIGDDHP
ALLVITAENRGEGAYETELEIRPPTNTHYQSMVTDREGFSRLICAQKKENQTVVVVCELG
NPMKQGQKLQAGLFFSVGNLEEVESQVSFTLQIKSKNSQNPDSNVAHLRIDVSAVAALEI
RGGSSPPECVLPIAKWEEKEQPADLEEVGPLVEHVYELRNLGPSTVNARVEVEFPTRHHG
DFLLYVFANASEDFLTCHTDSPDIDPYQLVKTGNATVGTVYKVKQNEVARPETQRKETVH
VNCTSGDTCLRFVCEATGLERGWSAVVKVMSRLWVQTFLERPYENYVLHSTARYEVIDMP
SKIQPKELPSGQAETQTSVVWRAPDGEKEVPVWWIIVAVVSGLFLLALLALIFWKVGFFN
RNRPPCDEDDDNAEQLAGAGQSEYAEMSPNTEDKQA
NT seq 3171 nt   +upstreamnt  +downstreamnt
atggaggaacaccggattcatatatcaatacaaatgatgggtctcatgctatttgctctc
ccacattactctgacaccttaaatctaaacctggttaacttcacggagttctctggccct
gagggaagcttctttggcttctctgcagatttctatcagtttagcaacaacaccatcagt
gttgtggttggggcccccagagccaacaccagtcagccaggagtcactgaggcgggggct
gtgtatctctgtccctgggcacagacaggaggggcctgtactaccatgacctttgacaca
aaaggtgatgaggtttatcctcaccagaacttagtgataaggtcctcaaagtcccaccag
tggtttggagctactgtgcgatcctccggaaactacattgtggcctgtgcccccctgttc
cactggaacgtgatagacgtgggtgaacgtgacgaggcccagaacactccagtgggtaac
tgcctagtgttgaacacactgacggggaaaacggttgacttctccccctgcaaagaagtc
atgacggagaaggtttacaaagccctgaagtacaataatgacagacgatactgtgaagtg
ggatttagctccgacataacaaaggagggaaggctccttattggtgcccctggaggctac
tactttcaaggtcagatcatcagtgcaggactgcttgacattgtcaacagtgccaagaga
cagaatgccaaaccttatgtggcaggacaaacccattcccctgagactggtggatacgat
cgttaccatgggtattctgtggccactggcgagttcactggagactcaataccagattat
gtggctggggtgcctaatgaccgcaacacagcaggaacagtcaaaatctatgatggaaat
tcaattgactttttgggagtgaaacacagattcttaggctctcaggtggcctcttacttt
ggccacagcgttgcagtgactgatattaacaatgatggacgagatgacatcctaatcggg
gcgcccctcttcatggagcgtgtgtcaggccagcagttacaggaggtgggccaggtgagt
gtgtacctgcagagagagcgctccaccttccactccaagccagaccagaagctgacaggt
tcccaggtgtacggacgctttggcagcaccatcgcccccctcggtgacctggacaaggac
ggttttaacgatgttgctgtgggagccccatcctcaggcattgaagggagggttttcatc
tacatggggactagcgatggactgtctccccagtatacccaagtcattgagagtcccttc
cagtccctaggctctccagcacagtttggcttcaccctgagaggggccattgacattgat
tcaaatggctacccagatctaattgttggtgcttggggagtcaataagattgctgtgtac
agggctcaagccgtggtgatggccaagacccaactctccctctaccctgacttcttgaac
ccagatgtgaaggagtgtgagcaccccaccaccaacgagcctgtggcctgcttcacagtc
atgatgtgcattagtgtgtctggccacagcattccagaggagatagttctagatgcagag
cttcaactggacaagatgaaacagccaatggccaggaggaccctgttgctgcagaccaat
ctgccccaagagtatttccagctaaccattcagagagatgtgggagtggtctgcaggaac
caaactgcttacctaaggcatgagtcagagttcaaggacaagctgagccccatcttcatc
tccctgaactacagcctgtccaactccatctcccaggaggccatgctgcatggccagaga
gctgtggtcacacagaccaggatcattctggactgcggagaggacaacatctgtgtccct
gacctgaggctgactgctgaagcaggtaccgaccgtcttctgataggggatgaccaccct
gccctgttggtcatcacagcggagaacagaggagagggggcctacgagaccgagctggag
atacgtccaccaaccaacacacactaccagagtatggtgactgacagagagggcttcagc
aggttgatctgtgctcagaagaaggagaaccagacagtggtagtggtctgtgagctgggg
aaccctatgaagcagggccagaagctccaggccggtctgttcttcagcgtggggaacctg
gaggaggtggagagccaagtgtcattcacattacagatcaaaagcaagaacagccagaac
ccggacagtaacgtggcccatctgaggattgatgtcagcgctgtggcagctctggagatt
cgggggggctcctctccacctgagtgtgtcctgcccattgccaagtgggaagagaaggag
cagcctgctgacctggaggaggttggcccactagtggaacacgtctatgagttgaggaac
ctgggtccgagcacggtcaacgccagggtggaggtagagttccccacccgtcaccatgga
gacttcctgctctatgtgttcgccaacgcctctgaggatttcctcacctgccacactgac
tcccctgacatcgacccataccagttggtgaagaccgggaatgctactgttggtacagtg
tacaaggtcaaacagaatgaggtggcacggccggagactcagcgcaaagagaccgttcac
gtgaactgcaccagtggagatacctgtctgaggtttgtgtgtgaggccacaggtctggag
agaggctggagcgctgtggtgaaggtgatgtcccgactctgggtacagactttcctggag
aggccctatgagaattatgttctccactctacagcacgctatgaggttatagatatgccc
tctaagatccagccgaaagagctgccaagtggacaggctgagacccagaccagtgtggtg
tggagagctcctgatggagagaaggaggtgccggtgtggtggatcattgtggccgtggtc
tctggcctcttcctcctcgctctgctagctctgatcttctggaaggtggggttctttaat
cgcaaccgtcccccgtgtgatgaggatgatgacaatgcagaacagctagctggggctgga
cagtctgaatacgctgagatgtccccaaacacagaggacaagcaagcataa

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