Coregonus clupeaformis (lake whitefish): 121551235
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Entry
121551235 CDS
T08357
Name
(RefSeq) netrin-1
KO
K06843
netrin 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
121551235
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Heparan sulfate / Heparin
Axon guidance molecules
121551235
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
Thioredoxin_8
BNR_6
Motif
Other DBs
NCBI-GeneID:
121551235
NCBI-ProteinID:
XP_041719728
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MIRILEVWVTLVAISLLVKGALGGYGMSMFAAQSSPPDPCYDENGNPRRCIPDFVNSAFG
KDVRVSSTCGTPASRYCVVTEKEEERTRDCHTCDAGDTKKTHPPAYLTDLNNPHNLTCWQ
SENYVQYPQNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIFKSMDYGKSWVPFQFYSTQC
KKMFNKQNKAAITKQNEQEAICTDSHTDMHPLTGGLIAFSTLDGRPSAHDFDNSPVLQDW
VTATDIKVTFSRLHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHASKCVKDREGN
LVCECKHNTAGPECDRCKPFHYDRPWQRATAREANECVACHCNLHARRCRFNMELYKLSG
RRSGGVCLNCRHNTAGRHCHYCKEGFFRDMSKAISHRRACKACDCHPVGAAGKTCNQTTG
QCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVASPTATYISSEEPLDCDSHCKTSKG
KLKINMKKYCKKDYAVQVHVLKGDKAGEWWKFTVNIISVYKQGEQRIRRGDQLLWVRAKD
VACKCPKIKLGRKYLLLGTDDDSPGQSGVVADKGSLLIPWKDLWGRRLRKFQQRDKRGKC
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgataaggattttagaggtttgggtcactttggtggccatttctctgctggttaagggg
gctcttggaggttatgggatgagtatgtttgctgcccagtcgtcccctccagacccatgc
tatgatgagaacggcaacccccggaggtgcatccccgatttcgtgaactccgctttcggg
aaggacgtgcgcgtctccagcacctgtggaaccccggcctcaaggtactgcgtcgtgacc
gagaaggaagaggagaggactagggattgccacacctgcgatgcaggggacacaaagaag
actcatccacccgcgtatttaactgatctcaacaaccctcataacctcacctgctggcag
tcagaaaactatgtccagtatcctcagaacgtcactctcactttgtccttgggtaaaaaa
tttgaggtcacctatgtgagcttgcagttctgttcaccccgacccgaatctatggctatc
tttaagtccatggactatggcaaatcctgggttcctttccaattctactctacccagtgt
aagaagatgtttaacaagcagaataaggcggcaattaccaagcagaacgaacaagaggcg
atttgcacggactctcacacggacatgcacccgctgacaggtgggctcattgcgttcagc
accttggatggcagaccctcggcgcacgacttcgacaactctcccgtgctgcaggactgg
gtgacagccaccgacatcaaggtgacgttcagccgactgcacacgtttggagatgagaac
gaggacgactcggagctggctagagattcttacttttacgcggtatcagacctgcaggtt
ggcgggcggtgcaagtgcaacggccacgcttcaaagtgcgtaaaagatagggaaggaaac
ctggtatgcgagtgcaagcacaacaccgcagggccggagtgtgacaggtgcaaacctttc
cattatgaccgtccttggcagcgcgcaaccgcaagagaggcaaacgaatgtgttgcctgc
cactgtaacctgcacgcccggcgctgtcgtttcaacatggagctatacaagctgtctggg
cggaggagcggcggagtctgtctcaactgccgccacaacactgccggacgccactgccac
tactgcaaggagggcttcttccgggacatgtccaaggccatctcccacaggagggcctgt
aaagcgtgtgattgtcatccagttggcgcagccggcaagacctgcaaccaaaccaccggc
cagtgcccctgcaaggacggcgtgactggcatcacctgcaaccgctgtgccaagggctac
cagcagagccgctctcctatcgccccctgtataaagattccagttgcatcgcccaccgcc
acctatatcagctctgaagagcccttagactgtgattctcactgcaagacatccaagggc
aagctaaagatcaacatgaagaagtactgcaagaaagactatgctgtccaggtgcacgtc
ctcaaaggagacaaggcaggggagtggtggaagttcaccgtcaacatcatctccgtctac
aagcaaggagaacaacgcatccggcgcggtgaccagctcctgtgggtgcgtgccaaggat
gtggcctgcaagtgccccaaaatcaagcttggcaggaagtacctgctgctgggcacggat
gatgactcccctgggcagagtggcgtggtggcggacaagggcagcctgctcatcccctgg
aaggacctgtggggccggagactgaggaagttccaacagcgcgacaagaggggcaagtgt
taa
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