Coregonus clupeaformis (lake whitefish): 121551242
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Entry
121551242 CDS
T08357
Name
(RefSeq) RNA-binding protein with serine-rich domain 1 isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03013
Nucleocytoplasmic transport
cclu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121551242
03015 mRNA surveillance pathway
121551242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121551242
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
121551242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_3
Nup35_RRM_2
RRM_5
Motif
Other DBs
NCBI-GeneID:
121551242
NCBI-ProteinID:
XP_041719738
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All DBs
Position
35:complement(21206543..21224286)
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AA seq
274 aa
AA seq
DB search
MKRAPSPTKRKEEEKSKDRGKEKTATKEGGDKERGREKGHKRRSASTGSSSSSSSSSGSS
SGSSSGSSSSGTSRSGSSRSSSSSSSSSSGSPGPGRRRHDNRRRSRSASKTQKKGDDKER
RRRSPSPKPTKVHLGRLTRNVTKDHIQEIFATYGKIKMIDMPVERLHPHLSRGYAYVEYE
TPEEAQKALKHMDGGQIDGQEITTSAILAPRIRPPPRRQSPPRRMPPPPPMWRRTPPRMR
RRSRSPRRRSPVRRRSRSPGRRRHRSRSSSNSSR
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagggcaccgtcacccacaaagcgtaaggaggaggaaaagtcaaaggacagggga
aaagagaagactgccactaaggaagggggggacaaggagagaggcagggagaagggccac
aaacgacgcagtgcttccactgggagcagcagcagctccagcagcagctccggctccagc
tctggttcctccagcggctccagttcctctggcaccagccgctctgggtcctcccggtcc
agctcctccagctcatcaagttcctccgggtcgcccggccccggccgccgccgccacgac
aaccgccgccgctcccgctccgcgtccaaaacacagaagaagggagacgacaaggagcga
aggagaaggagcccgagccccaagcccaccaaagttcacttaggaagactgaccagaaat
gtgaccaaggaccacatccaggagatctttgccacctatggcaagatcaagatgattgac
atgccagtggagaggctccacccacacctgtcccggggctacgcctacgtggaatacgag
actccagaggaggcccagaaggccctgaaacacatggatggcggtcagattgatggtcag
gagatcaccacctccgccattctggctccaaggatacgccctccccctcgcagacagtca
cccccacgcagaatgcccccacctccccccatgtggcgccgcaccccacctcgcatgagg
agaaggtctcggtcaccaaggagacggtcccccgtgcgccgacgctccaggtctccaggg
cgcagacgtcatcgttcccgctccagctccaactcctcccggtag
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