Coregonus clupeaformis (lake whitefish): 121551254
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Entry
121551254 CDS
T08357
Name
(RefSeq) zinc finger protein GLIS2
KO
K09233
zinc finger protein GLIS2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121551254
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121551254
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
121551254
Cilium and associated proteins [BR:
cclu03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
121551254
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
zf-C2H2_6
zf-C2H2_4
zf-C2H2_8
Zap1_zf1
FOXP-CC
zf-met
Motif
Other DBs
NCBI-GeneID:
121551254
NCBI-ProteinID:
XP_041719756
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Position
35:complement(21846219..21905036)
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AA seq
518 aa
AA seq
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MLSLDEPLDLMLPRGCVNGRDRGARSPPTLTLSPIPSKRARQLRMADDGTAVIVPASPAS
PHTGVPVVSQEKPETPPTPPAVDLSTSPSSRHTSSSPEMTNGNGVSHRIIAGDSAHIRYV
ESRASSQAFQFFVPIGAGSGLHLPSSMFIGQPNDKRASPDLSADEQLACRWRKCHLLFDS
LQDLVDHVNDFHVKPEKDSGYCCHWDGCARKGRGFNARYKMLIHIRTHTNEKPHRCPTCN
KSFSRLENLKIHNRSHTGEKPYICPYEGCSKRYSNSSDRFKHTRTHYVDKPYYCKMAGCL
KRYTDPSSLRKHIKAHGHSVAQEQGSPGGLGSLLKGGPLGVGMGGGGGKLGESELSYISG
AHIIIPSAAAALLGGHALQGLGGSIPLSPLGPRPLDLSMLGGCPSSPCTTSILSFNGSPL
SLATKSSLGLSPAFPSSALGLGPTMVPVSLGGSMGSSTSERRAHHHGRHCKGKIGGEEGE
DELHRGGVLNLSTGASHDPLSWVVIPSGTVVLKPAVVN
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccctggacgagccattggacctaatgctcccccgagggtgtgtcaacgggcgg
gacaggggtgcacggtcgccccccaccctcaccctctctccgataccctccaagcgcgcc
cggcagctccgcatggctgatgatggcacagccgtcatagtgcccgcctccccggcctcg
ccgcacacaggtgtgccggtggtctcccaagagaagccagagacaccccccacccccccg
gccgtggacctcagtacgtccccctcctcccgccacacctccagctccccagagatgacc
aacggaaacggggtctcccaccgcatcattgcaggggactcagctcacatccgttacgtg
gagagcagagcctcctcgcaggccttccagttcttcgtgccgattggtgctgggtccgga
ctccacctgccgtcatccatgttcattggccagcccaacgacaagcgggcctctcccgat
ctctcagcagacgaacagctggcctgtcgctggaggaagtgccatcttctctttgactcc
ctgcaagacctcgtggaccatgtcaacgacttccatgtcaaacctgaaaaggattctggc
tactgctgccactgggatggctgcgctcgcaaagggcggggcttcaacgctaggtacaag
atgcttatccatatccgtacccacaccaatgagaagcctcaccgttgccccacctgcaac
aagagcttctctcgcctggagaacctcaagatacacaaccgctcacacacaggtgagaag
ccctacatctgtccatacgagggctgcagcaagcgctactccaactccagcgaccgcttc
aagcacacacgcacccactacgtggacaagccctactactgcaagatggccggctgcctg
aagcgctacacagaccccagctccctccgtaagcacatcaaggcccacggccactctgta
gcccaggagcaaggctctccgggcgggctgggctccctgctcaaggggggtcccctgggg
gtggggatgggtggaggaggggggaagctgggggagtcggagctgagctacatcagtggg
gcccatatcatcatccccagcgccgctgccgctctcctggggggccacgctctgcagggc
ctggggggctccatccctctatcccccctcggcccccggcccctggacctgagcatgctg
ggggggtgccccagctccccttgcaccacctccatcctgtccttcaatggttctcctctg
agcttggccaccaagtcatccctggggctctccccggccttcccctcctcggcccttggg
ctggggcccaccatggtccccgtgtccctaggaggatctatggggtcgtccacctcggag
cgcagggcccaccaccacgggcgtcactgcaagggaaaaattgggggggaggagggggag
gacgagcttcaccgtgggggggtgctgaacctctccacgggggcctcccacgaccccctg
tcctgggtggtcatcccctctggcacggttgtgctcaagccagctgtggtcaactaa
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