Coregonus clupeaformis (lake whitefish): 121551301
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Entry
121551301 CDS
T08357
Symbol
samd1a
Name
(RefSeq) sterile alpha motif domain containing 1a
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121551301 (samd1a)
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
121551301 (samd1a)
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Gene cluster
GFIT
Motif
Pfam:
SAMD1_WH
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
121551301
NCBI-ProteinID:
XP_041719811
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All DBs
Position
35:20026056..20032575
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AA seq
419 aa
AA seq
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MSEPVYRDWILDTIDSLRSRKARPDLERICRMVRRRHGSAPERTSEELEKLIQEQTVLKV
NYKGSISYRNAAKVVRRSRKKDDHTTKTTAVEEANHSDLSNGDSALVPIDQDETENLEDE
VPVSMETDSTMEEEEEEEGADEDGHEGSSPSPGGEKAVQGGSGAVHPYSAPCSPSGSHPG
PSPSPVSDHPSTCKTSRRSSSLSPSSPLALRQNECLCDSAFCPAEHGPSGMQRNTGTGAL
KTIVQPSGTCPWVQKSLVKREREDGVRMEESGLTSDQLVPDCVDETMKGSDRRPKTLSFP
SDDFAKYKKGMDVASYVMAQDDVKNDLKNGEVSVKKETTRQNLLLWSVADVATYFSAAGF
PEQAVAFRTQEIDGKSLLLMQRSDVLTGLSIRLGPALKIYERHVKVLQRTHFLDEEDDL
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacccgtttaccgcgattggattttggacactattgactcactgcggtcgcga
aaagccagaccagaccttgaaagaatttgtcgaatggtccggagacgacatggatcggcg
ccagaacgaaccagcgaggaactcgagaaactgatccaagagcaaacagtcttgaaagtt
aactacaagggctcgatttcgtatcgaaatgcagccaaagtagtcagaagaagcaggaaa
aaggatgatcacacgaccaaaacaactgcggtggaagaagctaaccactccgatttgagc
aacggggacagcgcactcgtacccattgaccaggatgagacagagaatttggaggatgag
gtgccagtgtcaatggagacagacagcaccatggaggaggaggaggaagaggagggggct
gatgaagatggccacgagggctcctctccctctcctgggggtgagaaagctgtgcagggg
gggtctggtgctgtccacccctactctgccccctgctcccccagcggctcccaccctggc
ccaagcccaagccctgtgtctgaccacccctctacctgcaagactagtaggaggtccagc
tctctgtccccctctagtcccctggccctcaggcaaaatgagtgtttgtgtgactctgcc
ttctgccctgctgagcatggaccctcagggatgcagagaaacacaggaactggggcttta
aagacgatagtacagccatcggggacctgtccatgggttcagaagagcttggtgaagaga
gagagagaggatggggtgaggatggaggagagtggtctcacttctgaccaactggttcct
gactgtgtggatgagaccatgaagggttctgacagacggcccaagacgttgtcttttccc
tctgacgactttgctaaatacaagaaggggatggacgttgcctcttacgtgatggctcaa
gacgatgtcaagaacgatttgaaaaacggagaagtctctgtgaagaaggagacgacgagg
cagaacttattgctgtggagcgtggcggacgtggccacctacttctctgctgcaggcttt
ccagagcaggctgtagctttcagaacacaggaaattgatggaaagtccctgctcctgatg
cagcgcagtgacgtgttgactggcctgtccatcagacttgggcccgccctaaagatctac
gagcgccacgtgaaggtgctgcagaggacccacttcctggatgaggaggacgatctctga
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