Coregonus clupeaformis (lake whitefish): 121551309
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Entry
121551309 CDS
T08357
Name
(RefSeq) sphingosine 1-phosphate receptor 1
KO
K04295
sphingosine 1-phosphate receptor 5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121551309
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121551309
G protein-coupled receptors [BR:
cclu04030
]
Rhodopsin family
Lipid
Sphingolipid
121551309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
121551309
NCBI-ProteinID:
XP_041719820
LinkDB
All DBs
Position
Unknown
AA seq
384 aa
AA seq
DB search
MEASHAAYAAVAAPTVVPGYLLRMFRQYQSNAVIRDHYNYTGKLKENKYKDGLKPEAIAF
LLICLLIVLENAVVLLAIWKNKKFHLPMYYLLGNLTLSDLLAGFTYMVNIVTSGANTLKM
TPVLWFLREGGVFITLAASVISLLAIAIERHVTMVRMKPYRGAKRGRMFALIGASWVLSV
FLGVLPVLGWNCMGRLDQCSTVLPLFAKSYILFFITVFTAVLLAIVVLYVRIFCTVKSNT
KHLGSGPQRKGLARKSQKYMALLKTVTIVLGVFIVCWLPLFILLLLDFCCPARSCQVLFK
ADYFLGIAMFNSLLNPIIYTLTSKDMRRAILRLLCRRCLLTKDGQVKKIGVPFLECSTSK
TEAPSSANFTPSTIKAIYPRMSKT
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggaagcatcgcatgctgcttacgccgctgttgctgcccccactgtggttccagggtac
ctgctccggatgttccgccagtaccagagcaatgctgtcatcagagatcactacaactac
acaggcaaactgaaggagaacaagtacaaggatggactaaagccagaggccatagccttt
ctgctgatctgcttgctcatagtgctggagaatgctgtggtgctgttggctatctggaag
aataagaaattccacctgcccatgtactatctgttaggcaacctaacactctcagaccta
ctagcaggattcacctacatggtgaacattgtgacttcaggggccaacacgttaaagatg
acccctgtgctgtggttcctgagggaggggggagtcttcataacgctggccgcctccgtc
atcagcctcctggccatcgccattgagcgccacgtcaccatggtgaggatgaagccctac
cggggggccaagcgaggccggatgtttgccctgatcggggccagctgggttctgtcagtg
ttcctgggggtgctacccgtcctgggctggaactgtatgggccgtctggaccagtgctcc
accgtcctgccgctcttcgccaaaagctacatcctcttcttcatcaccgtgttcaccgct
gtgctgctggccatcgtggtgctttatgtgcgcatcttctgcactgtcaagtccaacaca
aagcacctgggctctggcccgcagcgcaaaggcctggcccgcaagtcccagaagtacatg
gccctgctgaagaccgtcaccatcgtgctgggcgtcttcatcgtctgctggctgcctctc
ttcatcctcctcctgctggacttctgctgcccggcacggagctgccaggtgctcttcaag
gcggactacttcctgggcatcgccatgttcaactctctcctcaaccccatcatctatacc
ctgaccagtaaggacatgaggagggccatcctgaggctgctgtgtcgacgctgcctcctc
accaaggatggccaggtgaagaagataggggtgcccttcctggagtgtagtaccagtaag
actgaggcgccctcctctgccaacttcaccccttccactattaaagccatctaccccagg
atgtcaaagacatga
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