Coregonus clupeaformis (lake whitefish): 121551326
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Entry
121551326 CDS
T08357
Name
(RefSeq) long-chain fatty acid transport protein 1-like
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
121551326
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cclu01004
]
121551326
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121551326
Lipid biosynthesis proteins [BR:
cclu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
121551326
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
121551326
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
121551326
NCBI-ProteinID:
XP_041719855
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Position
35:27793839..27805709
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AA seq
648 aa
AA seq
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MRNAASASVSLGSLGLLRLFGVPWSWSFAAGFGVFLGTGGWKYLYIVVRTAKRDLNGLYV
LLRVKIALWHHLRRNSNIPSIFAQTVKQHPNKPALIYDATGETWTFTQLDLLSNAVAQWA
LAQGWAPGDVVALFMESRPLQVALWLGLAKVGVEAALINFNLRRDALLHCVGMSASRGIV
FGAELAGAMLEVSSSLSPSMVRFCTGELSVDCLASLAAQNLDPILASAPTLPPPPCIPPK
SFNDRLFYIYTSGTTGLPKAAIVVHSRYYRIAAFGYHAFRMHQDDIIYDCLPLYHSAGNI
MGVGQCLINGLTVVVKKKFSASRFWEDCIKHDCTVVQYIGEICRYLLSQPVRPSEKGHRV
RLAVGNGLRPSVWEAFTERFGVAQVGEFYGATECNCSIANMDGKVGACGFNSRILPNVYP
IRLMKVDEETTELVRDRHGLCVPCRPGEPGLLVGRINQQDPLRRFDGYANQDDTRKKIAN
NVFKKNDSAYLSGDVLVMDELGYMYFRDRSGDTFRWRGENVSTTEVEGTLSGLLGQADVA
VYGVSVPDVEGKAGMAAIADPTGTFDCDAFLREVQQALPPYARPVFLRISPQVDTTGTFK
IQKTRFQREGYDPRISTDQIYFLNSRAGRYEAVNEELHSAIVEGRMAL
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaatgcagccagtgcctctgtgtctctgggatcgctgggtctgctgcgtctcttc
ggggtcccctggtcctggagctttgcagcaggcttcggggtctttctgggcacaggcggt
tggaagtatctctacattgtagtccgcactgccaaaagagacctcaatggcctttacgtg
ttgttacgagtcaagatagccttgtggcaccacctacgacgcaacagcaatatcccctcc
atatttgcccagacggtgaagcaacacccaaataaacctgccctcatctacgacgccaca
ggagagacgtggaccttcacccagctggacctgctgtctaacgctgtggcccaatgggct
ctggcccagggctgggccccgggggatgtggtggccctcttcatggagagccggcccttg
caggtggccctctggctgggcctggctaaggtgggggtggaggcggccctcatcaacttc
aacctgcggagggacgcgctcctgcactgtgttggaatgtctgcgtccagagggatcgtg
ttcggagccgagctggctggtgccatgttggaggtgagctcatccctgagcccgtcgatg
gtgcggttttgtacaggagagctcagtgtagactgtctggcctccctggctgcccagaat
ctggaccctatcctggcctcggcccctacactgccccctcctccctgcatcccacccaag
agcttcaatgatcgtctgttctatatatacacctcaggcaccacaggactccctaaagca
gccatagtggtgcacagtcggtattaccgtatcgctgcgtttggctaccatgctttccgc
atgcaccaggatgacatcatctacgactgccttcccctctaccactctgcaggtaacatc
atgggtgtaggccagtgtctcatcaatggactcactgtggtggtgaagaagaaattctca
gccagtcgcttctgggaagattgcatcaagcacgactgcactgtggtacagtacataggg
gagatctgtcgctacctgctgtcccagccggtgcggccatctgagaagggtcaccgggtt
cgcctggccgtggggaatgggctacgccctagcgtctgggaggccttcaccgagcgcttc
ggggtggcccaggtcggggagttctacggagccaccgaatgcaactgtagcatcgccaac
atggacggcaaggtgggagcttgtgggttcaacagccgcatccttcccaacgtgtacccc
atccgcctcatgaaggtggatgaggagaccacggagctggtgcgggacaggcacggcctg
tgtgtgccctgccgccctggggagccagggctgctggtgggaaggatcaaccaacaggac
ccgctacggaggtttgatggctacgccaaccaggacgacaccaggaagaagattgccaac
aacgtcttcaagaaaaacgactctgcatatctgtcaggggatgtgttggtgatggatgag
ctgggctacatgtacttccgggaccgcagtggggacacgttccgctggagaggagagaac
gtctccaccaccgaggtggagggaacactgagtggtctgctgggccaggctgatgtggct
gtgtatggggtatctgtaccagatgtggaaggtaaggcagggatggctgccatcgcagac
ccaacagggacatttgactgtgatgcgttcctgcgagaggtccaacaggccctgccccct
tacgcccgccccgtgttcctacgcatttccccacaagtagacaccacaggtacctttaaa
atccagaagacccggtttcagagggagggatacgacccgcgcatatcaaccgaccagatc
tactttttgaactccagagcagggcgttatgaggctgtgaatgaggagctacacagtgct
atagtggagggtaggatggctctatga
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