KEGG   Coregonus clupeaformis (lake whitefish): 121551414
Entry
121551414         CDS       T08357                                 
Name
(RefSeq) retinoic acid-induced protein 1
  KO
K19749  retinoic acid-induced protein 1
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cclu03000]
    121551414
Transcription factors [BR:cclu03000]
 Eukaryotic type
  Zinc finger
   Other zinc fingers
    121551414
SSDB
Motif
Pfam: zf-HC5HC2H_2 zf-HC5HC2H
Other DBs
NCBI-GeneID: 121551414
NCBI-ProteinID: XP_041719988
LinkDB
Position
Unknown
AA seq 2281 aa
MQSFSRERSGFHGNQPCYQQEHHELSRLESYRQHPHHGQTRQVYEAHALATATGMPPAGP
GPGPGSGSGPIPGPKDCYSQQVYPGYPQGNGGGVGGGGGSTPHDKKAYSGGSQVPPPPPQ
HMQAGGYSNHMGPGGYPAQYMSEGHLQQSKWDDPAQLAQYEQEMVGRMEPGPPGSSQYLD
QNMLAHSQSQCHQPHQASAPVYTSPHHQPHPPNPGQSPLMYPQSHLHYPQHPPSPSPSSS
SYMEKCSPMPHCYKGYSMPPSSQYARQMGSHSSLKQGGYRPPPQNSYSYQQTPSRGGYES
QPPLQGMPTSQEAHPKYQHFSQSQQNYCLSELSVRSPEQYYQTCSPASSHSPARSVGRSP
SYSSTPSPLMTNPESFQYSQPPMTPGAASSSSSSSVGLQDQGLLMPPRSHPSPSPNVAHP
TPQHSYTQGVSMKERFSEKLLANPSLWSLNALTSQVENISNNVQQLLLSEAMVANKKGGK
RNSSNSTGSSGGGSSKKEEEYKGVPGGPEGQHGGGPVQDPYSTNQHQLVPMEMQEGGYSS
SSDEQLERGYYYCGQGRSPAQAPNNTHLGLDTASSCSMTSPDDMSTRSGDSVSGLQSVAS
RDNLTPDPRSQGGHDPPQTPMKSVGDERSPVSVTVPSPMKQESQSPPDIQRLGVPLKENF
EELAWTEKMADYEEDGMKKTPDSERDCRGSDDVTDTSEKQEKWPEDEKGPALYSKINKAV
TKGKSYCCDENMYHEIQNKYDRGKGDSADKSPSLSDSSHKGDLGQEMKSEAFKSESPTDS
ESSVKTSPFISRGDLDQDQYLTEKEDSSENISPTPRGEALDERLSASEKRESREEEEEEE
DEEGEEERQQDSISPPLSAEEREGEESESLPSTEEVLNNSTSPQKEHSVELCSRTEGQSL
AEPQPYRNTEPAETETQAAQPDPTAAAAESPEMGSAICDTPPQSHSAMMVFSALSEIATP
PAPAHTRDHIDRSDSNVLEPDSPQLPGKSILHSAPSWANTPPSPKKGDEDMEPGISCPSA
VTPSANPEPVAPSAHPQAFGRKHGRGRRRLMHSGVEFRRQLSVEREGESASSPPQKPCMP
SSKSPLFSDQIDMAAHQDIIMTSETPKLLVEGSRSRMCTRSFNTQDTTPKDPQPPERRKP
GRKPGSKPGPKPGPKSGLKPGPKPGLKPGPKPGPKPSLKPGPKLGMKPGSKPGPKPGLKP
GPKPGPKPGLKPGPKPGPKPGPKPGPKPTEGAPRGRPRGTGSKLKLAQQEGPIQPITGGP
GRGQKSLSINSQQGDGNQEVKAPGKDGKNMVLRSRKPPQDKLPKEKEKEQSEGILTQTLT
GITKPNAVLENEERTSIEQALPVFPNQTDTSVTDTSVTDTSKTDTSVTDISKIDTSVTDT
SVKDTSVTDTSKIDTSVIDTSKIDTSVTDTSVTDTSVTDTSVTDTSKTDTSVTDTSVTDT
SVTDTSVTDTSKTDTSVTDTSVTDTSKTDTSIPVAPPEKPKEPTVAVPPVTAPVPPLKRK
PSPLPLEPPVKKKRGPKPKPKPQPQQPQPETPQSDQSNQSNQSNQSNQANQSNQPPLVKS
KEMGVRGPKRRLKRGRHLKASLITVLTKDNPPPTMTDCDVVSEMPSVPSQCPTKTKYLPP
RKGRGLKYEAMVQKINMGTGSKKHLPTPQPESTEAIVEEVTSKPVSLAISEESEAPVAVV
SAPEVTREEVAGDEWNSTGVQNTEQEGGVQQNTGEGVQPESLPAGVPDAAAASDANKPTR
TKRRKWAMVESTDATVVAMETGSLIINTPRLAKQRAIKNNHEMHLKQRRKRKGGQPPSEG
PVADEKVGATTGEQQTETQTPTDTTLTTMPDLPAGPGEITDSPQVIATEMIQPPPSKRGR
KPSSSWSKKRGRGRAPGEQQSSKPLKVHKKPGPKKGIKDAIEVIEAVVKAAGREARLKKK
TSKKESPAVSEEKQPEPSLKQVLSKTPKSGIKHSFCPYVRIDSSRDFASLCTIVNRRNEE
LKMVFQKPRKKSPDKIKNPVTVAKAIPSSSALLQGPLVNKNLIDRCLTCCLCGKPANYRE
LGDLCGPYYPEDSIPRKILSARHIEPPRENQEKTTSSNSSIEEPSSSTPKSEGDPSSEKE
GIKKGDMETVTKEGSSSTSGGGHHHQPHPHHWRPRRAERAPAEGGSTHRPTLRDRFRRMQ
QLQEERRAAEATASGQEGGSGGGGLLQRLQGEAEAKEHWAHENCAIWTNGVIMVAGRLYG
LTEAVHTSTETSCSKCQRVGASISCCWKGCPHKYHYICAKEIGCMFQEDNFSLKCPKHEA
L
NT seq 6846 nt   +upstreamnt  +downstreamnt
atgcagtccttcagcagagagaggagcggtttccacggcaaccagccctgctaccagcag
gagcaccatgaattatcacgcctggagagctaccgacagcacccccaccatggacagacc
agacaggtctacgaggcacacgccttggccaccgctacagggatgcccccagcgggacca
gggcccggacctggatctggaagtggacccattcctggacctaaggactgttacagccag
caggtataccctggatacccccaaggcaatggaggtggtgtgggtggtggaggaggttcg
acgcctcatgataagaaggcttacagtggggggagccaagtgcctcctccccctccccag
catatgcaggcggggggctacagcaatcacatgggcccggggggatacccggcccagtat
atgagcgagggccacctccagcagtctaagtgggacgacccagctcagctagctcagtac
gagcaggagatggtaggcaggatggagccgggtccccctgggtcatcccagtatctggac
cagaacatgctggctcactcccagagccagtgtcaccagccccaccaggcctctgctcca
gtctacaccagcccacaccaccaaccccatcccccaaacccaggccagtccccattgatg
tacccccagagccacctccactacccccagcaccccccatccccctcgccctcctcctcc
tcctacatggagaagtgcagccccatgccccactgctacaagggatatagtatgccaccc
agctcccagtacgctaggcagatgggcagccacagcagtctgaagcaggggggataccga
ccgccaccccagaacagttacagctaccaacagactccctccaggggtggctacgagtcc
cagcccccactacaaggtatgcccacttcccaggaggcccaccctaaataccaacatttc
agccagtcccagcagaactactgtctgtccgagctgtccgtcagatcccctgagcagtac
taccagacatgtagtcccgcctccagccactcccctgcacgctccgtgggacgctcaccc
tcctacagctccaccccttcccctctgatgaccaatccagagagcttccagtacagccag
ccaccaatgaccccaggggcggcttcttcttcctcctcttcctcagtgggtctgcaggac
cagggcttgctgatgccgccgcgctcccacccgtccccgtcccccaacgtggcccaccca
accccgcagcacagctacacgcagggggtctccatgaaggagcgcttctctgagaagctg
cttgccaatcccagcctgtggagcctgaatgccctcacctctcaggtggagaacatctcc
aacaacgtgcagcagctgttgctatccgaggccatggtcgccaacaaaaaggggggcaag
cgcaacagcagcaatagcactgggagcagtggaggcggctcctccaagaaggaagaggag
tacaagggagtgccaggaggccccgagggtcagcacggtgggggccccgtgcaggacccc
tacagcaccaaccagcaccagctcgtccccatggagatgcaggaggggggatactccagt
agttctgacgagcagctggagagggggtactactactgtggccagggcaggagcccagct
caggcccccaacaacacacacctgggcctggacacggcctcatcctgctccatgacctct
ccggacgacatgtccacccggtctggtgactctgtgtccggcctgcagagcgtggcttcc
agggacaacctgacccctgaccccaggtcacagggtggtcacgaccccccacaaaccccc
atgaagagcgtgggggatgagaggtcccccgtgagtgtgacggtccccagccccatgaag
caggagagccagtcccctccagatatccaacgtctcggcgtgccactgaaggagaacttt
gaggagttggcctggacggagaaaatggcagactacgaggaagatggcatgaaaaagact
cccgacagcgagcgtgactgcagaggcagcgatgatgtcacagacacctccgagaagcag
gagaaatggccggaggacgagaaaggcccagctctgtatagcaagatcaacaaagcagtt
accaagggaaagagctactgctgcgacgagaacatgtaccatgagatacaaaacaaatat
gaccgaggcaaaggggactcggcggataagtccccaagcctctcagactccagccacaag
ggagacctgggccaggagatgaaatcggaggccttcaaatccgaatctcccaccgactct
gagagctcagtgaagacatcaccctttatttccaggggtgaccttgaccaagatcaatat
ttaacagagaaggaagacagctcggagaacatatcccctaccccccggggcgaggctttg
gacgagaggctctcggcctcagagaagagagagagcagagaagaagaagaggaggaggag
gatgaggagggagaggaggagaggcagcaggactctatatctcctcctctgtctgctgag
gagagagagggagaagagagtgagagcctgccatcgactgaggaggtcctcaacaatagt
acgagcccacagaaggagcattctgtagagctgtgcagcagaacagaaggccagagcctg
gctgagcctcagccttaccgtaacacagagcctgcagagacagaaacccaagcagcacaa
ccagacccaacagcagcagcagcagaatccccagaaatggggtcagccatttgtgacact
ccaccccagtctcactcggccatgatggttttctcagctctcagtgagatagcaacacct
ccagctccggctcacaccagggaccatatcgatcgcagcgattccaacgtgctggagcct
gactcccctcagctgccagggaagtcgatactgcactcagctccctcctgggccaacacc
ccaccctcgccaaagaaaggtgatgaggacatggagccgggcatcagctgcccaagcgct
gtgaccccctcagccaacccggaacccgtggccccatctgcacacccgcaggctttcggc
cggaagcacggccgaggcaggaggagactgatgcactcaggtgtggaattcaggagacag
ctgagtgtggagagagagggggagagtgcctcttcacccccccagaaaccctgcatgccc
tccagcaagagtcctctgttctccgatcagatagacatggccgctcaccaggacataatc
atgacgagcgagacacccaaactgctggttgagggctcccgctccagaatgtgcactcgc
tcgttcaacacgcaggacacaacccctaaggatccccagccccctgagagacggaaacca
gggcggaaaccaggttcgaaaccaggcccaaaaccgggcccgaagtcagggttaaaacca
gggcctaaaccaggactaaaaccaggaccaaaaccaggtccaaaaccgagtctaaaacca
ggaccaaaactaggtatgaagcccggttcgaagcccggcccaaaaccaggtttaaaaccg
gggcctaaaccaggcccaaaaccaggtctgaaaccagggcctaaaccaggtccaaaacca
ggaccaaaaccaggtccaaaaccaactgaaggagcaccccggggtcgtcccaggggcaca
ggctctaagttgaagttggcacaacaggaaggtcccattcaacccatcacagggggtcca
ggaagaggccagaagagcttgagcatcaacagtcagcaaggtgatgggaaccaggaagtg
aaagctccaggcaaggatggaaagaacatggtcctgagatccagaaagcccccccaggat
aagcttccaaaggagaaagagaaggagcaatctgagggaatcctaactcaaaccctgaca
ggtataacaaagcccaatgcagtgttagaaaatgaggaacgtacgagcatagagcaagcc
ctccctgtctttcctaaccagacagacaccagtgtaacagacaccagtgtaacagacacc
agtaaaaccgacaccagtgtaacagacatcagtaaaatagacaccagtgtgacagacacc
agtgtaaaagacaccagtgtaacagacaccagtaaaatagacaccagtgtaatagacacc
agtaaaatagacaccagtgtaacagacaccagtgtaacagacaccagtgtaacagacacc
agtgtaaccgacaccagtaaaacagacaccagtgtaacagacaccagtgtaacagacacc
agtgtaacagacaccagtgtaaccgacaccagtaaaacagacaccagtgtaacagacacc
agtgtaaccgacaccagtaaaacagacaccagtatacctgtcgctccacctgagaaacct
aaagaaccgactgtagctgtacctcctgtaactgcacctgtacctccactcaaaagaaaa
cccagtcctctgcctctagaacctccggtgaagaaaaagcgaggtccaaaaccaaaacca
aaaccacaaccacaacagccacagcctgaaactccccagtctgaccagtccaaccagtcc
aaccagtccaaccagtccaaccaggccaaccagtccaaccagcctccattagtcaaatcc
aaggagatgggtgtccgaggccccaagaggaggctaaagcgaggcagacacctcaaggcc
tctctgatcactgtgctgaccaaagataaccctcctcccacgatgactgactgtgatgtg
gttagtgaaatgcccagtgtcccttctcagtgtcccactaaaaccaagtacctccccccg
cgcaaaggcaggggtctgaaatacgaggcgatggttcagaaaataaacatgggcactggt
tcgaagaaacacctgccaacaccacagcccgagagcacagaggcaatagtggaggaagtg
acgtcaaagcctgtgtcgctggccatctcggaggagagcgaggccccagtggcggtggtg
agcgcccctgaggtgacacgggaggaggtagcaggggatgagtggaactccacgggggtc
cagaacacagaacaggagggaggggtgcagcagaacaccggggagggggtgcagccggag
tcactcccagcgggggtgccagacgctgcagcggcgagcgatgccaacaaacccaccagg
accaagaggaggaaatgggccatggtggagagcacggacgccacggtggtcgccatggag
acgggaagcctgatcatcaacacgccgcggctggccaagcagagggccatcaagaacaac
cacgagatgcacctgaaacagaggaggaagaggaaaggaggacagcctccctcagagggg
cctgtggctgacgagaaggtaggggcaacaacaggagaacaacagacagagacacagaca
cccactgacacaacattaacaacaatgcccgatctaccagccggcccaggtgagatcaca
gacagcccgcaggtgatcgccacagaaatgatccagccgcctccctccaaacgagggagg
aagccctcttcatcctggtccaaaaagagagggagaggcagagccccaggtgaacagcag
agcagcaaacctctgaaggtgcacaaaaaacctggtcctaaaaagggaatcaaagacgcc
attgaagtgattgaagcagtggtgaaggctgcagggagggaggccagactcaagaaaaag
acatcgaaaaaggagagccctgcggtgtcggaggaaaagcagccggagccctctctcaaa
caggtactgagcaaaacccccaaaagcggaatcaaacattccttctgtccatatgtgcgt
atcgacagctccagagacttcgcctctctctgtaccatcgtaaacaggcgcaatgaagag
ctgaagatggtgtttcagaagccccggaaaaagagcccggacaaaattaaaaacccagtc
acggttgccaaggcgatacccagctcctcagctttgctccaggggcccttggttaacaaa
aacttaattgacaggtgtctaacgtgttgcctgtgtggaaagccggcaaattaccgtgag
ctgggggatttgtgtgggccctactacccagaggatagcatcccgcgcaaaatcctgtca
gcaagacatatagaacccccgagggaaaaccaagagaaaacaacaagctccaacagtagc
atcgaggaaccaagcagcagcaccccaaaaagcgaaggagaccccagctccgaaaaggaa
ggcattaaaaagggggatatggagacagtcacaaaggagggcagtagtagtactagtggt
gggggtcaccatcatcagccccacccccaccactggcgccccaggagggcagagagggca
cctgcggagggcggaagcacgcaccggcccaccctacgggataggttcaggaggatgcag
cagctccaggaggagaggagggctgcggaggccacagctagtggtcaggaggggggcagt
ggaggaggaggcctgctccagagattgcagggggaggctgaggctaaggaacactgggcc
catgagaactgtgctatctggaccaatggggtcatcatggtggccgggaggctgtacggc
ctgacagaggctgttcacacttccacagaaacgagctgctccaagtgccagagagtgggt
gcgtccatcagctgctgctggaaaggctgccctcacaaataccactacatctgcgccaag
gagataggctgcatgttccaagaggacaacttttcactgaaatgtccgaaacacgaggct
ttgtaa

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