Coregonus clupeaformis (lake whitefish): 121551420
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Entry
121551420 CDS
T08357
Name
(RefSeq) CCR4-NOT transcription complex subunit 9
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121551420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121551420
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
121551420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
121551420
NCBI-ProteinID:
XP_041720000
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Position
4:complement(8414019..8440099)
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AA seq
297 aa
AA seq
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MLATGAAATTALVQVDREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSCGT
IAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPF
LHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVA
TFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDN
PRAREALRQCLPDQLKDATFAQVLKDDTTTKRWLAQLVKNLQEGPVTDGRGIPLTTQ
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgctggctacaggcgcagctgcaaccacagccctggtgcaggtggatcgggagaagatc
taccagtggatcaacgagctgtctagcccagagaccagggagaatgccctcctggagctc
agcaagaagagggagtctgtccctgacctggcgcccatgctctggcactcctgtggcacc
attgctgccctcctgcaggaaattgtgaacatctacccctccataaacccaccaactctg
acagcccaccaatccaacagagtatgcaacgccctcgcgctcttacagtgtgttgcctcc
cacccagagactcggtctgcatttttggcggcacacattcctcttttcctctaccccttc
ctgcatactgtgagcaagacacgcccgtttgagtacctgcgcctcaccagcttaggagtc
ataggtgctctggtcaaaacagacgaacaggaggtgatcaacttcctgctcaccacagag
atcatccctctatgcctgcgcatcatggagtcaggcagcgaactctccaaaacggttgct
actttcatactccaaaaaattctgctggacgacaccgggctggcgtacatatgccagacc
tatgaacgcttctctcacgtggcaatgattcttgggaaaatggtgctgcagctgtcgaag
gaaccatctgcacgtctgctgaaacatgttgtacgctgctaccttcgcctctctgataat
ccaagagcgcgagaagcgctgcgccagtgcctgcccgaccagttgaaggatgccactttc
gcccaggtgctaaaggacgacaccaccacaaagcgctggctggcccagctggtcaagaac
ctgcaggagggcccggtgacggacggccgaggcatccccctgaccacacagtga
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