Coregonus clupeaformis (lake whitefish): 121551435
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Entry
121551435 CDS
T08357
Symbol
lss
Name
(RefSeq) lanosterol synthase isoform X1
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00100
Steroid biosynthesis
cclu01100
Metabolic pathways
Module
cclu_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
121551435 (lss)
Enzymes [BR:
cclu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
121551435 (lss)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Motif
Other DBs
NCBI-GeneID:
121551435
NCBI-ProteinID:
XP_041720026
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All DBs
Position
4:8499770..8514630
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AA seq
736 aa
AA seq
DB search
MTEGTCLRRRGGPYKTEPATDLTRWRLSNIEGRQTWRYVEDQYTSDREQTMLEAHSLGLD
TSKFIPGSPLAHTAVESALKGMAFYSQLQAEDGHWAGDYGGPLFLLPGLLITCHITQIPL
PEAWKKEMVRYLRSVQLADGGWGLHIEDKSTVFGTALSYTTLRILGVGPDDPDMVRARNN
LHSKGGAVGISSWGKFWLAILNVYSWEGMNTLLPEMWLFPTWFPAHPSTLWCHCRQVYLP
MSYCYAVRFAAKEDPLVLSLRQELYVQDYATINWPAQRNNVAACDMYTPHSTLLTVAYMV
MNVYEGHHSSALRGRAVKELYDHIQADDRFTKCISIGPISKTINMLVRWLVDGPSSAAFQ
EHVSRIPDYLWLGLDGMKMQGTNGSQLWDTAFAAQAFLEAGAQDNPRLEECLKHAHQFLT
ITQIPDNPPEYQKYYRQMNKGGFPFSTRDCGWIVADCTAEGLKSVMLLQEHCPFISQYVP
SERLCDAVNVLLSMRNSDGGFATYETKRGGRLLELLNPSEVFGDIMIDYTYVECTSAVMQ
ALRHFQHMYPEYRTEEIRSTLREGLEYCRRVQRPDGSWEGSWGVCFTYGVWFGLEAFACM
GHTYHDGSGVCEEVQSACDFLVAHQMEDGGWGEDFESCEQRRYVQSANSQIHNTCWALLG
LMAARYPDVHVIERGIQLLIDKQLPNGDWPQENISGVFNKSCAISYTSYRNVFTVWTLGR
FSKLYPSSPLAGKVKL
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgacagagggaacatgccttcgtaggagggggggaccgtacaagacggagccagcgaca
gacctgacccgctggaggctgagtaacatagagggcaggcagacatggcgctatgtagag
gaccagtacacatcagacagggagcagaccatgctggaagcccattcacttggtttggat
acgagtaagttcatccctggctctcccttggcccacactgcggtggagtcagccctgaag
ggcatggcattctacagccagctccaggcagaggatggccactgggcaggagactacgga
ggacccctcttcctgctaccaggtctcctgatcacctgtcacataacccagatccctctc
cctgaggcctggaagaaggagatggtgagatacctgcgctctgtccaactggctgacgga
ggctggggcctacacattgaagacaagtccacagtgtttggcacggccctcagctacacc
accctgaggattctgggagtgggaccggatgacccggatatggttcgggccaggaacaac
ctgcacagcaaaggtggcgctgtgggcatctcctcctggggtaaattctggttggccatc
ctcaatgtgtacagctgggaaggaatgaacacactcctcccggagatgtggctgttccct
acctggttccctgctcacccatccactctctggtgccactgtcgccaggtctacctccct
atgagctactgctacgctgtcaggtttgctgcgaaggaggaccccctggtgctcagcctc
agacaggagctgtatgtccaggactatgccaccatcaactggcctgctcagaggaacaat
gtggcggcatgtgacatgtacacaccacacagcacattgctcaccgtggcttacatggtc
atgaacgtgtatgagggccaccacagcagcgctctacgaggaagagcggtcaaagagctg
tacgaccacatacaggctgacgaccgtttcaccaagtgcatcagcatcggcccaatctcc
aaaacgatcaacatgctggtgcgctggctcgtggatggaccctcctccgctgccttccag
gagcacgtgtccaggatcccagactacctctggttgggattggatggtatgaaaatgcag
gggaccaatggatcacagctatgggacacggctttcgcagctcaggccttcctagaggca
ggggctcaggacaaccccaggttagaagagtgtcttaaacacgcccaccagtttctcacc
atcacacagatacctgacaacccccccgaatatcagaaatactacagacagatgaacaag
ggagggttccccttcagcacgcgggactgtggctggatcgtggccgactgcacggcagag
ggcctaaagtcagtgatgcttctgcaggaacactgtcccttcatcagtcagtacgtcccc
tcagagcgcctgtgtgacgccgtcaatgtgttgctgagcatgagaaacagtgacggcggt
tttgccacttatgagaccaagcgaggagggagactgttggagctactcaacccctcagag
gtgtttggtgacatcatgatagactacacctacgtggagtgcacctcagcagtcatgcag
gctctgagacacttccagcacatgtaccctgaataccggacagaggagatcaggtccact
ctgagagaaggattggagtactgccggagggtgcagaggcctgatgggtcgtgggaagga
tcctggggagtgtgcttcacctatggggtctggttcggcttggaggccttcgcctgcatg
ggtcacacctaccatgatggcagtggtgtgtgtgaggaggtgcagagtgcctgtgacttc
ctggtggcccaccagatggaggatgggggctggggcgaggactttgagtcctgtgagcag
cgtcgctacgtgcagagtgctaactcccagatccacaacacctgctgggccctgctgggc
ctcatggctgccaggtacccagatgtacatgtgattgagagaggaatacagctgttgatt
gacaagcagctgcccaatggagactggccacaggaaaacatctcgggcgtgttcaataag
agctgtgccatcagctacacctcctacaggaacgtcttcaccgtgtggacgctgggacgt
ttctcaaaactctacccctccagccctctggccgggaaggtcaagctgtga
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