Coregonus clupeaformis (lake whitefish): 121551438
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Entry
121551438 CDS
T08357
Name
(RefSeq) far upstream element-binding protein 2-like isoform X1
KO
K13210
far upstream element-binding protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121551438
03041 Spliceosome [BR:
cclu03041
]
121551438
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
121551438
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121551438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
KH_Vigilin
SIMPL
Motif
Other DBs
NCBI-GeneID:
121551438
NCBI-ProteinID:
XP_041720029
LinkDB
All DBs
Position
35:31879778..31888160
Genome browser
AA seq
670 aa
AA seq
DB search
MSEYSAVPAPGAGAPLGGHLAIGIGNGGAIKKDAFADAVQRARQIAAKIGECAGVVPMNN
INAPDGFPFTAQKRQLEDPDQPESKKMAPQSDVDSATALSIGAQLAALAQQSARLTTTSE
EYSVPDGMVGLIIGRGGEQINKIQQESGCKVQIAPDSGGLPERSVSLTGSSDSIQKAKIL
LDEIVSRGRGTPPSSFHEATNGQSGSGQEMMIPAGKAGLVIGKGGETIKQLQERAGVKMI
LIQDASQGPNMDKPLRIIGEPFKVEQAMELVQEILRERDQPGFGDRNEYGSRMGGGGGGA
MDVPVPRHSVGVVIGRNGEMIKKIQNDAGVRIQFKPDDGTGPDKMAHIMGPPDCCDHAAQ
IIQELLQSIRVREEGGQGGPPGPPGMSPSGGGRGRSRGGQGSWGPPGGGGGEMTFSIPAH
KCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRGSPQQIDHAKQLIEDK
IEGPLCPVGPGPGGPGPMGAYNPGPYNPGPPGPHGGPHGYPPQGWGNTYQQWQPQAPHDP
SKAAGAADPNAAWAAYYGQYYQGGQPGGAVPGQPPPTPTAGGPAPGDQPQASQTPGGQPD
YTKAWEEYYKKMGVAQAGGSAAGPAGAPGGGQQDYSAAWAEYYRQQAAYYGQTGQAPGQP
ATPQQGQQTQ
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagtacagcgcggtaccggcacccggggctggagctcctctcggcggacatcta
gctattggtatcggtaacggtggcgcaataaaaaaagatgcctttgcagacgcggtacaa
cgggcccggcagattgctgccaagattggtgaatgtgcaggggtagtccctatgaacaac
atcaatgcaccagacggctttcccttcacagcacagaaacgacagctggaggacccagat
cagccggagagcaagaaaatggctccacagagtgacgtggactcagccacagctctgtcc
atcggagcccaactggcagcactggcccagcagagtgccaggctcacaaccacctcagag
gagtacagtgttcctgatggaatggtgggactcatcattggccgtggtggagaacagatc
aataagatccagcaggaatcgggctgcaaggttcagatagccccagacagtggaggttta
ccagagaggagtgtgtctctcacagggtcctcagactccatacagaaagccaaaatttta
ttggatgagattgtgtctcgggggaggggcacgcccccctcatccttccacgaggcgacc
aatgggcagagtggctcggggcaggagatgatgattcccgcaggcaaggctggcctcgtc
atcggcaagggaggggagaccatcaaacagctacaggagcgagcaggagtgaagatgatc
ctgattcaggatgcgtctcagggacccaacatggacaagcccctgcgcatcatcggggag
ccattcaaagtcgagcaagccatggagttggtgcaggagatactaagggagagggatcag
cctggcttcggagaccggaacgagtacggctcccgcatggggggaggaggagggggagcc
atggatgttccagtgccacgacactctgtcggggtggtgattggtcgcaacggggagatg
atcaagaagattcagaacgacgccggagttaggatacagttcaaaccagatgatggtaca
ggtccagataagatggcccacatcatgggcccaccagactgctgtgaccacgctgcccag
atcatccaggagctactgcagagcatcagggtcagggaggagggaggacaggggggtcct
cccgggcctccaggcatgtctccgagtggtggcggcaggggtcgcagccgagggggacag
gggagctggggtccccctggtggtggaggaggggagatgaccttctccattccggcccac
aagtgtggcctggtgatcgggcggggcggggagaacgtcaaggccatcaaccagcagact
ggggcctttgtggagatctcccgccagctgccccccaacggggaccctaacttcaagctc
tttgtcattcggggctctccgcagcagatagaccacgccaagcagctgatcgaggacaag
atcgagggtcctctctgtcctgttggtccaggtcctggtggaccaggccccatgggtgcc
tataatcctggtccctataacccaggaccccctggaccacatggtggtcctcatggctac
cccccacagggctggggaaacacctaccagcagtggcagccccaagcaccccatgacccc
agcaaggcagccggcgccgcggaccctaacgcagcctgggcagcctattatggccagtac
taccagggagggcagccagggggagcagtgcccggccagcccccgccaacccccaccgct
ggtggccccgcacccggagaccagccccaggccagccagacccccgggggccagcctgac
tacaccaaggcctgggaggagtactacaagaagatgggtgtcgcccaggcaggaggctct
gcagcggggccagcaggtgccccaggtggaggccagcaggactacagtgcagcctgggca
gagtactacaggcagcaggctgcttactacggccagacaggacaggccccaggacagcct
gccacccctcagcaaggccagcagacacagtga
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integrated database retrieval system
