Coregonus clupeaformis (lake whitefish): 121551462
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Entry
121551462 CDS
T08357
Name
(RefSeq) periplakin
KO
K10386
periplakin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121551462
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121551462
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
121551462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin_1st_PEPL
SH3_10
Plectin
ERM_helical
SR_plectin_7
Spectrin
Motif
Other DBs
NCBI-GeneID:
121551462
NCBI-ProteinID:
XP_045074225
LinkDB
All DBs
Position
Unknown
AA seq
1756 aa
AA seq
DB search
MFKKKPSKNSVTITPTKKAPSSELSALIEKLQKNADKVEKLIYETEQNLNKDVSKINEGK
QPLYQDDTNKRILNSLELLQGLDEDAVDAKRLQHPQAEMIEQDMKQLRERLRKLREDHDR
IYHLTRSEGLPSVNWGKIIDEKQVNLKNKGFGQDLPTIENEVEEHNIFHSEVEALAPHIS
ASDNKDNASGLQLNYNKLLASSSARQRHLLSLRDYMQRCTNELYWMDQQAGERINYDWSD
TNLDFPARQRQYENFISKCLESKEATVTQLNDDGDKLIATNHPGKNVIEAHMEAVHADWK
EYLNLLICEENHLKHMDEYHKFHKEARDTQDLLKRLETEVNQKYKPEFKDMYQIESLIRD
LDDQAKAMDHFDERVMALEKRSLQVLPLQFRRNTPQKLLPVEALCEFDTDEGQILRGERY
TLLSNKGPNWEVKDAAGHKLTAPGACFMIPPTDPESVSISNNLATQQKAIKMKVSGSKTT
LVKRLEELKKDGTAGSDKDEQQCRQLMAGLDKVTSDLDKQEKAIYARVRPPLEHTRPLQD
SADRLQDMKDIAAVVRKIEPEKSSKVREAEKFLTSNPKCASAPQLNGKVNEANNKYDKIN
LLLKCSEDKLQNSNRLENSLQNGKSVLSSYENKLAREEVAPADISSLEMTQRQLADIASE
LKTKRSAVTETEANLRAAKGSCDTMATKLQEHCPDIERQEGEVQKLNKRYDNLNRQIDTR
TQSLQRAKMSYNNYRSDYDNLNSWLSRVPNYEPTEKDNLSQVETKLVNQKNLLSDIKKKE
SDLNNVSKNAQLYQQAVKEYENDTEKFKSILDLEDGLVPQTYKRSRLESPALRVKEEESA
IEAKFTEVNAVNKQRLANLQFAQGLMNQQSDVIVCNNVQQVKSAAPGEEAWRIESQLKDE
IQRREQLEKDLEKIQTDIYMLEGQKPEDTVVKKEIIKKVPDPTLVDEVHNVRQKLSDETR
ATRAMDNELEALRLKLRGIETEIKEGAQQYTVKEVLRIERDRGQEEEVRRLREELEELRR
KKTIKDNEVVQITKQVTLLAQQKSKEQEVITEEEVIKVQNDPQLESEYRILLDRKQKEQE
NRKQLEDELRFLQDKLRRLEKEKSMAEEKISIKEVLKVEKDIAFEREVENLRRQHEDEKA
KHRSSQRERADLQRKISSLEEEKSRVIVQEKVREIVRPDPKAEAEVANLRMELVEHQRRY
RDADQQLKSHQDELKMLRNRGPQIEVKEIIKEVIKYKTDPQTERELEKLRNEIVDKTHQT
EKSEMEIRQLRDEIQRWKDTKPQVQIKEVVNEVLEYKENPKTKEEIEILKRKLADEQKKR
LDLERERSANEEKIRLRKIDLSQVREKLVQQEVVKMEEDPLLRSECNTFTQNINNEQRQR
ETLKVELYQLQRQKADLDAQLEELERERRARRDAELEIQRLRVRLNEMEVMDKENRERVT
VKQMVVLQQDPQQEKEHSILKLQVEEERHKRTLLEKELNVLLQQQVTLERIEVKEKVVRT
ETIQVEKDPEAEMEIEKMTRTLDQEKRRRLELDQELGSLKSRLSDMEFTNTKSSKELDYI
RDESSRLQQENQRLQNDIRRLQSEIQITSTETRSISNSAPMENGKNLELRLDSLQGELAE
LRAITRQKDEEIEKLQKGLAAIQIKREQRESHLRRSIVVIDPDSGKEMRPEEAYKLGLID
WKMFVNLQSQECDWEEISIKGPKGESSVLHDRKSGKKFSIEDALKAGNITTHQLQQYHNK
EITIQEFGVMVSGKTK
NT seq
5271 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagaaaaaaccctcgaagaatagcgtgaccatcacgccaacgaaaaaggcgccc
tcctctgagctgtctgctctgattgagaagctgcagaagaatgctgacaaggtggagaag
ctcatctatgagacggagcagaacctcaacaaggatgtgagtaagatcaacgagggcaag
cagcctctgtaccaggacgacaccaacaagcgcatcctgaactctctggagctgctgcaa
ggcctggatgaggatgctgtcgacgcaaaacgcctgcagcacccccaggctgagatgatc
gaacaggatatgaagcagctgagagagagactgaggaagctgagagaggaccatgaccgc
atctaccacctgacccgctctgagggcctgccgagcgtcaactggggcaagatcatagac
gagaaacaggtcaacctgaagaacaaaggttttggtcaggacctgccgaccatagagaat
gaggtggaggaacacaacatctttcacagtgaggtggaggccctggcccctcacatctca
gccagcgacaacaaggacaatgccagtggcctccagctgaattacaacaagctcctggcc
agttccagtgctcgacagcgccacctgctgagcctgcgtgactacatgcagcgctgcacc
aatgagctgtactggatggaccagcaggcaggggagaggatcaactatgactggagcgac
accaacctggacttccctgctcgtcagagacagtatgagaacttcatcagtaagtgtctg
gagtccaaggaggccactgtcacacagctgaatgacgatggagacaaactcatcgctacc
aaccatcctggcaagaatgtcattgaggctcacatggaggcagtgcatgctgactggaag
gaatacctgaacctgctcatctgtgaggagaaccacctgaaacacatggacgagtaccac
aagttccacaaagaggcccgggacacccaggatcttctgaagagactggaaaccgaagtc
aaccagaagtacaaaccagagttcaaggacatgtaccagattgagagcctcatcagagac
ctggacgaccaggcgaaggccatggaccactttgatgagcgtgtgatggctctggagaag
cgcagcctacaggttctccctctccagttccgtaggaacacccctcagaagctgctcccc
gtcgaggcgctgtgtgagttcgacactgacgagggtcagatcctgcgtggagagaggtac
accctcctgagtaacaaggggcccaattgggaggtgaaggacgcggccgggcataaactg
accgctccaggggcctgcttcatgatcccccccacagacccagagtctgtctccatctcc
aacaatctggccacccagcagaaggccattaagatgaaggtgtctggcagtaagaccacc
ctggtcaaacgcctggaggaactgaagaaagacggcaccgctggctctgacaaggatgag
cagcagtgtcgccagctgatggccggcctggacaaggtgaccagtgatctggacaaacag
gagaaggccatctacgctcgagtacgccccccgctggagcacaccaggccactgcaggac
agcgctgaccgcctgcaggacatgaaggacattgcggccgtggttcgtaagatcgagccg
gagaagtcgtccaaggtgagggaggctgagaagttcctgacctctaaccctaaatgtgcc
agcgcccctcagctaaacggcaaggtgaacgaggccaacaataaatatgacaagatcaac
ctgctgctcaagtgctccgaggacaagcttcagaattccaaccgcctggagaactccctt
caaaacgggaaaagtgtattgtccagctatgagaacaagctggccagggaggaagtcgcc
ccagcagacatctcgtctctggagatgacacagcgccaactggctgatattgcatcagag
ctgaagaccaagaggtccgcggtgactgagacggaggctaacctgcgtgcggccaaaggc
agctgtgacaccatggcaaccaagctgcaggagcactgccccgacatcgagaggcaggag
ggcgaggttcagaagctgaacaaacgctacgacaacctcaacaggcagatcgacaccaga
actcagagcctgcagagggctaagatgtcgtacaacaactaccgcagtgattacgacaac
ctgaacagctggctgtcccgtgtgccaaactatgagccaactgagaaggacaacctcagt
caggtggaaaccaagctggtaaaccagaagaacctgctctccgacattaaaaagaaggag
tctgacttgaacaacgtatcaaaaaatgcccaactttaccagcaagccgtcaaggaatat
gagaatgatactgaaaagttcaagtctattctggaccttgaagacgggctggtccctcag
acctacaagagaagcagactggagtcccctgcactcagggtcaaggaagaggaatctgcc
attgaagcgaaattcactgaagtgaatgcagttaacaagcaaaggctggcgaatctgcag
tttgcccaaggccttatgaatcagcaatcagacgtgatcgtctgcaacaatgtccagcaa
gtcaaatctgccgctcccggagaagaagcctggaggatcgagagtcaactgaaagacgag
atccagaggagagagcagctggagaaggatctagagaaaatccagacagacatctacatg
ttggagggccagaagccggaggacaccgtcgtcaagaaggagatcatcaagaaggttccg
gatcctactctggtcgacgaggtccacaatgtccgtcagaagctgtcggacgaaacccgg
gccacccgggccatggacaacgagctggaggcactgaggctgaagctgcgcggcatcgaa
acagagatcaaagaaggagcacagcagtacaccgtgaaggaggtgctgcgtatcgagagg
gaccgcggccaggaggaagaggtgaggaggctcagggaggagctggaggagctgaggagg
aagaagaccatcaaggacaatgaggtggtccagatcacgaagcaggtgacgctcctggcg
cagcagaagtccaaggagcaggaggtgatcacagaggaggaggtgattaaagtgcagaac
gacccgcagctggagagcgagtaccgcatcctcctggacaggaagcagaaggagcaggag
aacaggaagcaactggaggacgagctgcgcttcctccaggacaagctccgcaggctggag
aaggagaagtccatggccgaggagaagatctccatcaaggaggtgctgaaggtggagaag
gatatcgccttcgagagggaggtagagaacctcaggaggcagcacgaggatgagaaggcc
aagcaccggtcttcccaaagggagcgcgccgacctccagaggaagatctccagcctggag
gaggaaaagtcaagggtcatagttcaggagaaggtgagggagatcgtcaggcccgacccc
aaggctgaggctgaagtggccaacctgcgcatggaactggtagagcaccagaggaggtac
agagacgccgaccagcagctgaagtcccaccaggacgagctgaagatgctgagaaacaga
ggtccacagatcgaggtcaaggagatcatcaaggaagtcatcaagtacaagacggacccg
cagaccgagagggagctggagaagctccgcaacgagattgtggacaagacgcaccagacg
gagaagtcagagatggagatcaggcagctgagggacgagattcagcggtggaaggacacc
aagccccaggtgcaaattaaagaggtggttaacgaggtgctggagtacaaagaaaacccc
aagaccaaggaggagattgaaatactgaagaggaagctggcggacgagcagaagaaacgc
ctggacctggagagggagcgatcagctaatgaggagaagatccggctaaggaagatcgac
ctgtcccaggtcagggagaagttggtccagcaggaggtggttaagatggaggaggaccca
ttactgaggtcagagtgcaacaccttcacgcagaacatcaacaatgaacagaggcagagg
gagaccctgaaagtggagctctaccaacttcagaggcagaaggccgacctggacgcacag
ctggaggagctggagcgagaacgtcgggctaggcgcgatgcagagctggagatccagagg
ctgagggtcaggctgaatgagatggaggtcatggacaaggagaacagggagagggtcaca
gtgaaacagatggtggttctccagcaggacccccagcaagagaaagagcactccatcctc
aagctgcaggtggaggaggagagacacaagcgtaccctgctggagaaggagctgaatgtc
ctgctccagcagcaggtcaccctggagaggattgaggtgaaggagaaggtggtgcgcacc
gagaccatccaggtggagaaggaccctgaggccgagatggagatcgagaagatgacgagg
acgctggaccaggagaagaggaggaggctggagctggaccaggagctgggcagcctcaag
tcccgcctgtccgacatggagtttaccaacaccaagtcgtccaaggagctggactacatc
cgcgacgagagcagccgcctccagcaggagaaccagaggctacagaacgacatccgcagg
ctgcagtccgagatccagatcacctccacggagacccggagcatctccaactcggccccc
atggagaacgggaagaacctggagctgaggctggactcgctgcagggggagctggccgaa
ctgagggccatcaccaggcagaaggatgaggagatcgagaagctgcagaagggcctggcg
gcgatccagatcaagagggagcagagggagagtcacctgaggagatccatcgtggtcatc
gaccccgactcgggcaaggagatgcggccggaggaggcctacaagctgggactgattgac
tggaagatgtttgtgaacctccagagccaggagtgcgactgggaggagatcagcatcaag
ggccccaagggggagtcctctgttctccacgacaggaagtctgggaaaaagttctccatt
gaagacgccctgaaggctgggaatatcaccacccaccagctgcagcagtaccataacaaa
gagatcaccatacaggagttcggggtcatggtgtcgggaaagaccaagtga
DBGET
integrated database retrieval system