Coregonus clupeaformis (lake whitefish): 121551478
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Entry
121551478 CDS
T08357
Symbol
hgs
Name
(RefSeq) hepatocyte growth factor-regulated tyrosine kinase substrate isoform X1
KO
K12182
hepatocyte growth factor-regulated tyrosine kinase substrate
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03250
Viral life cycle - HIV-1
cclu04144
Endocytosis
cclu04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121551478 (hgs)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121551478 (hgs)
04145 Phagosome
121551478 (hgs)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121551478 (hgs)
Membrane trafficking [BR:
cclu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
121551478 (hgs)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VHS
Hrs_helical
FYVE
FYVE_2
ELMO_ARM
UIM
FYVE_CARP1-2
UIM_2
Allexi_40kDa
Motif
Other DBs
NCBI-GeneID:
121551478
NCBI-ProteinID:
XP_041720087
LinkDB
All DBs
Position
35:complement(32614539..32634815)
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AA seq
784 aa
AA seq
DB search
MGKGGGTFERLLDKATSQLLLETDWESILQICDLIRQGDTQAKYAIGAIKKKLMDKNPHV
ALYGLEVLESVVKNCGQTVHDEVACKTTMEELKDLLKTEPNVRNKILYLIQAWAHAFRNE
PKYKVVQDTYQIMKVEGHVFPEFKESDAMFAAERAPDWVDAEECHRCRVQFGVMTRKHHC
RACGQIFCGKCSSKYSTIPKFGIEKEVRVCEPCFELLNNHPSLSPPPRKAEGGKPVGTST
PVAPGPAELPPEYLTSPLSQQSQVVVQETVPPKRDEAALQEEEELQLAIALSQSEAEEKE
RMRQKNSYGVYPKADPAPVTSSAPPVTSLYSSPVNSSAPSAEDVDPELARYLNRTYWEKK
QEEARKSPTPSAPAPVPLAAEPLPISQPQPVETLAPLPAQVVMAPPPVNIVEQQYQNGES
EENHEAFLKALQNSVTTFLNRMKSNHMRGRSITNDSAVLSLFQSINTMHPQLLEILNQLD
EKRLYYEGLQDKLAQVRDARAALNALRDEHREKLRRAAEEAERQRQIQLAQKLDIMRQKK
QEYLEMQRQLAIQRLQEQEKERQMRLEQQKHTIQMRAQMPAFPMSYPQMQSLPPNVAGGV
VYGQPGGPPNYPGTFSPSGSVEGSPMHTVYMDQSGPGRYQAMPPDPNMYMYQPAGTNGQP
APPGQAPPTTSPAYSNYQPTPTQGYQQNVVSQAQSLPPMSQPPPTNAMSYVAYPPPYAMQ
NMMAALPGQDPNMPPQQPYMQGPGQQPMYQQMAPPGGPQQQVQQQQQQPPQVHPGSEAQL
ISFD
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaggtggtggtacatttgagaggcttcttgataaagcgaccagccagctgctg
ctggagacagactgggagtccatcctgcagatctgtgatctcattcgtcaaggagacaca
caggcgaagtatgccatcggtgccattaagaagaagctgatggataagaacccgcatgtg
gccctctatggtcttgaggtgttggagtcagtggtgaagaactgtggtcagacggtccat
gatgaggtggcctgtaaaaccaccatggaggagctgaaggatctactgaagactgagccc
aacgtgaggaataagatcctatacctgatccaggcatgggcccacgccttccgcaacgag
cccaaatacaaggtggttcaggacacgtaccagatcatgaaggtggagggtcacgtgttt
ccagagttcaaggagagtgatgccatgtttgcagcagagagagctccagattgggtggat
gcggaggagtgtcatcgctgcagggttcagtttggagtgatgactagaaagcaccactgc
agagcctgtggtcagatcttctgtgggaagtgttcctccaagtactccaccatccccaag
ttcggcattgagaaggaagtgcgtgtgtgtgagccctgcttcgagctgctcaacaaccac
ccttccctctctcccccacctaggaaagctgaggggggtaaacccgtcgggacatccacc
cccgtggccccaggcccggcagagctgcccccagagtacctgaccagccccctgtcccag
cagtctcaggtagtggtccaggaaacagtgccccccaaacgggacgaggcggccctgcag
gaggaggaggagcttcagctggccatcgccctatcacagagcgaggctgaggagaaggag
aggatgagacagaagaactcgtacggggtctaccccaaagctgaccccgccccagtcacc
tcctcagccccgcccgtcacctctctctactcctctcctgtgaactcctctgctccctca
gctgaagatgttgaccctgagctggctcgctacctgaacagaacatactgggagaagaaa
caggaagaggcacgcaagagtcccaccccctctgcccctgcccccgtgccattggctgcg
gagcccctgccaatcagccagccccagccagtggaaactctcgccccactcccagcccaa
gtcgtcatggccccgcctccagtcaacatagtggagcagcagtatcagaacggtgagtcg
gaggagaaccacgaggcgttcctgaaggctctgcagaactcggtcaccaccttcctgaac
cgtatgaagagtaaccacatgcgtggtcgcagcatcaccaacgacagcgccgtgctctct
ctcttccagtccatcaacaccatgcacccccagctactggagatcctcaatcagctggac
gagaagagattgtactacgagggtctacaggacaagctggcccaggtgcgtgatgcgaga
gcggccctgaacgccctacgagacgagcacagagagaagctgcgtcgtgctgcagaggag
gcagagagacagagacagatccagctggcccagaaactagacatcatgagacagaagaaa
caggagtacctagagatgcagcgtcagctggccatccagcgtctccaggagcaggagaag
gagagacagatgaggctggagcaacagaaacacaccatccagatgagagcccagatgcct
gctttccccatgtcctacccacagatgcagtctttgccccccaacgtggcaggaggggtg
gtgtacgggcagccggggggaccccccaattacccaggcacctttagcccctcaggctca
gtggaggggtcgcccatgcacaccgtctacatggaccagtctggaccaggacggtaccag
gccatgcctccagacccaaacatgtacatgtaccagccagcaggaaccaatgggcagcct
gcaccccctggccaggccccgcccaccactagccccgcctactctaactaccagcccaca
cccacacagggataccagcagaacgtggtttcccaggcccagtctctgccccccatgtcc
cagcctccccccactaacgccatgtcctacgtggcctaccctccaccctatgccatgcag
aatatgatggcagccctacctgggcaggaccctaacatgcccccacaacaaccctacatg
cagggcccaggacaacagcccatgtaccaacagatggctccccctggtggcccccagcag
caggttcagcagcagcagcagcagcctccgcaggtccatccaggcagcgaggcacagctc
atctctttcgactga
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