Coregonus clupeaformis (lake whitefish): 121551480
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Entry
121551480 CDS
T08357
Name
(RefSeq) AP-1 complex subunit beta-1 isoform X1
KO
K11825
AP-2 complex subunit beta-1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04142
Lysosome biogenesis
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121551480
04142 Lysosome biogenesis
121551480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121551480
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Clathrin-mediated endocytosis
AP-2 complex
121551480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
Alpha_adaptinC2
HEAT
Arm
PDS5
HEAT_EZ
Cnd3
HEAT_GCN1
HEAT_MROH2B_C
NELF-A_N
Arm_2
PIK3R4-like_middle
HEAT_spiro
API5
FANCI_S3
Motif
Other DBs
NCBI-GeneID:
121551480
NCBI-ProteinID:
XP_041720096
LinkDB
All DBs
Position
35:complement(5834135..5902806)
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AA seq
952 aa
AA seq
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MTDSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQT
DNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITE
YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANA
VAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDEREAQSI
CERVTPRLSHANSAVVLSAVKVLMKFLELLPKESDYYNTLLKKLSPPLVTLLSGEPEVQY
VALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKE
YATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIFRK
YPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFHDESTQV
QLTLLTAIVKLFLKKPSETQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTDPVTAKEV
VLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPNAFVEGSHGIHRKHLPIQHGSI
DTGESPVSAGPAAPIEQAQSVIPSQGDLLGDLLNLDLGPPVNVPQQSSMQMGAVDLLGGG
LDSLLGGDLGGGVGGSPAVGQNFIPSSVPNTFAPSPTPAVLSSGLNDLFELSTGMAITTG
GYVTPKSIWLPAVKAKGLEISGTFSRRQGQMYMDMTFTNKALQHMTDFAIQFNKNSFGVI
PTTPLPIHTPLMPSQSIEVSLPLNTIGPVMKMDPLNNLQVAVKNNIDVFYFSGLIPLNIF
FVEDGKMERQVFLATWKDIPNENELQYQIKECHLNADTVSGKLQNDNIYTIAKRNVEGQD
MLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVTQYVYQVYDSVLKN
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgactgactcaaaatattttacaacaaataaaaaaggggagatatttgagctgaaggca
gagctgaacaatgagaagaaagagaagaggaaggaggcggtgaagaaggtcattgcggct
atgactgtgggcaaggatgtcagctccctcttcccagatgtggtgaactgcatgcagact
gacaatctggagctgaaaaagcttgtctacctgtacctgatgaactatgctaagagccag
cctgacatggccatcatggctgtcaacagctttgtcaaggactgtgaggaccctaatccc
ctgattcgggccctggctgtgcgcaccatgggctgcatccgcgtggacaagatcacagag
tacctgtgtgagccgctgaggaagtgtctaaaggacgaggacccgtacgtgaggaagacg
gcggcggtgtgcgtggcaaagctccatgacatcaacgcccagatggtggaggaccagggc
ttcctggactccctcagggacctcatcgccgactccaaccccatggtggtggccaacgca
gtggcagctctgtctgagatcagtgagtcccaccccaacagcaacctgctggacctcaac
ccccagaacatcaacaagctgctgacggccctcaacgagtgcaccgagtggggccagatc
ttcatcctggactgcctgtccaactacaaccccaaagacgagcgcgaggcccagagcatc
tgcgagcgggtcacgccccgtctctcccatgccaactcggcagtggtgctgtcggccgtc
aaggtgctgatgaagttcctggagcttctgcccaaggagtcggactactacaacaccctg
ctgaagaagctgtccccaccgctggtcaccctgctctctggggagccagaggtccagtat
gtggccctcagaaacatcaacctcatcgtccagaaaaggcctgagatcctgaagcaggag
atcaaggtgttctttgtcaagtacaacgaccccatctacgtcaaattggagaaactggat
atcatgattcgcctggcctcccaggccaacatagcccaggtgttggctgagctgaaggag
tacgccaccgaggtggacgttgactttgtgcgcaaggcagtgagagccatcggacgctgt
gccatcaaagtggagcaatctgctgagcgctgtgtgagcaccctgctggacctcatccag
accaaagtcaactatgtggtgcaggaggccattgtggtcatcagggacatcttccgcaaa
taccccaacaaatatgagagcatcatcgccacactgtgtgagaacctggactctttggac
gagccggatgcgcgtgccgccatgatctggatcgtgggcgagtacgctgagaggatcgac
aacgctgacgagttgctggagagcttcctagagggcttccacgacgagagcacccaggtc
cagctcactcttctgacggccatcgtcaagctattcctcaagaaaccctctgagactcag
gagctggtgcagcaggtccttagtctggccacacaggactctgacaaccctgacctgcgt
gacaggggttacatctactggcgcctgctgtccaccgacccggtgactgccaaggaggtg
gtcttgtccgagaagcccctgatctcagaggagacggacctgattgagcccaccctgctg
gatgagctcatctgccacattggctccctggcctctgtttaccacaagccccccaacgcc
ttcgtggagggtagccacggcatccaccgcaagcacctgcccatccagcacggcagcatt
gacacaggcgagagcccggtgagcgcagggccagcggcccccattgaacaggcccagtca
gtcatcccctcccagggagacctgctgggagacctgctcaacctggacctgggtcccccc
gtcaatgtgccgcagcagtcttccatgcagatgggcgccgtcgacctgctgggcggaggc
cttgacagcctgttggggggagacctgggaggaggtgttgggggaagtccagcagtggga
cagaactttatcccctcgtcagttcccaacacattcgccccatcgcccactcctgctgtg
ctcagcagcggcctcaacgacctgtttgagctctccacaggcatggccatcaccacagga
ggctatgttaccccaaagtctatatggctacctgcagtgaaagctaaagggctggagatc
tcaggcacattctcccggcgacagggccaaatgtacatggacatgaccttcaccaacaag
gccctgcagcacatgaccgacttcgctatccagttcaacaagaacagtttcggagtgatc
cccaccacccctctgcccatccacactccactgatgcccagccagagtatcgaagtttcc
ctgcctctcaacaccattgggccagtcatgaagatggacccactgaacaatctacaggtg
gctgtgaagaacaacattgacgtcttctacttcagcgggcttatcccacttaatattttc
tttgtggaggacggtaaaatggagcgacaggtgttcctggccacctggaaagatatccca
aatgagaacgagctgcagtaccagatcaaggagtgccacttaaacgcagacacagtgtcg
gggaagctgcagaacgacaacatttacaccatcgccaagaggaacgtggagggccaggac
atgctctaccagtccctcaagctcaccaacggcatctggatcctggcagagctccgcatc
caacctggcaaccccaactacacgctgtccttgaagtgccgggctcctgaggtgacccag
tatgtctaccaggtgtacgactcagtcctgaagaactga
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