Coregonus clupeaformis (lake whitefish): 121551513
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Entry
121551513 CDS
T08357
Name
(RefSeq) charged multivesicular body protein 6-like
KO
K12195
charged multivesicular body protein 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03250
Viral life cycle - HIV-1
cclu04144
Endocytosis
cclu04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121551513
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121551513
09143 Cell growth and death
04217 Necroptosis
121551513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121551513
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121551513
Membrane trafficking [BR:
cclu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
121551513
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121551513
Exosomal proteins of other body fluids (saliva and urine)
121551513
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
Hydantoinase_B
Motif
Other DBs
NCBI-GeneID:
121551513
NCBI-ProteinID:
XP_041720145
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Position
35:26690588..26700048
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AA seq
207 aa
AA seq
DB search
MGNVFGRKSRPSRVTEQDRAILQLKQQRDKLKHYQKRVTLQLEKERNLAKQLLKDGKKEK
ALILLKKKRYQDQLLDKTENQISNLERMVQDIEFVQIEMKVIEGLKVGNDCLKSMHEAMS
LEDVERIMDETQDAVEYQRQIDEMLSGSLTQEDEDAVLSELEAITQGEDVELPEVPTEPL
PEVPEPAETEPARRLAKNKENREMLAA
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacgtttttgggagaaagagtcgcccttctcgagttacagaacaagaccgagcg
attctgcaactgaaacagcagagagataaactgaagcactaccagaagcgagtcaccctg
cagctggagaaggagaggaatctggccaagcagctgctgaaggatggaaagaaagaaaag
gcactgattcttctcaagaagaagcgttatcaggatcagctgctagacaagactgagaac
cagatatcaaacctggaacgcatggttcaagacattgagtttgtccagatcgagatgaaa
gtcattgaggggctgaaggttggaaatgactgtctgaagagtatgcatgaggccatgtca
ctagaggatgtggagagaatcatggatgagacccaggatgctgtagagtaccagaggcaa
atagatgagatgctgtcaggctccctgactcaggaggatgaggatgctgtgttatctgaa
ctggaggctatcactcagggagaagatgtagaacttccagaggtccccactgagcctcta
ccagaggtcccagaaccagctgagacagagccagcgagaagactagcaaagaataaggag
aacagagagatgctggcagcgtag
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