Coregonus clupeaformis (lake whitefish): 121551586
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Entry
121551586 CDS
T08357
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cclu03016
]
121551586
Enzymes [BR:
cclu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
121551586
Transfer RNA biogenesis [BR:
cclu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
121551586
Prokaryotic type
121551586
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
121551586
NCBI-ProteinID:
XP_041720227
LinkDB
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Position
19:58073360..58074843
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AA seq
296 aa
AA seq
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MAGTVTGVTVPKHSLSKLQSLNGLFAIYKKEGPTSADVLNSLKEALLKEAGVKNPNPRKR
KKQALKMGHGGTLDSAASGVLVVGIGNGTKMLSTMLAGSKKYMAVGELGKATDTLDATGN
VVHEKLYDHITREAFEEKLKQFTGDVMQVPPLYSALKKDGKRLSVLLKQGHEVEAKPARP
VTVYNLSLQDFTPPLFTLDVECGGGFYIRSLVDDLGKALSSCAHVRKLIRTKQGQFTLDA
HTLREEHWTLQHIVQSMQPCSGSEVTKEDGTRPNLLVKVNAQVKGDKNGEDEKGPL
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggctggaacagtaactggcgtaactgtgcctaaacattctttatcaaaactacaatct
ttaaatggactttttgccatttataaaaaggaaggacctacgtctgctgatgtattaaac
tcattaaaagaggcactcctcaaagaggccggtgtgaaaaatcctaatcccagaaagagg
aagaagcaagctctgaaaatggggcatggcgggactctggacagtgcagcctctggtgtg
ctcgttgttgggattggaaatggaacaaagatgcttagtactatgctggctggttcaaag
aaatacatggctgttggagagttgggaaaagcaacagacacccttgacgccacaggcaat
gtggttcatgagaagctctatgatcacattaccagggaagcctttgaggagaagttgaag
caattcacaggggatgtcatgcaggttcctccactgtactctgcgctgaagaaggatggc
aagcgtctgtctgtcctgctgaaacaaggccacgaggtggaagccaaacctgcacggccg
gtcacagtgtataacctgtcactgcaggacttcacaccacccctcttcactcttgacgtt
gaatgcggtggtggattttatatcagaagcttggtggacgacctgggaaaagcactctcg
tcgtgtgcccacgtgaggaagctgatccggaccaaacagggtcagtttacccttgacgcc
cacacgctgcgggaggaacactggacactgcagcacatcgttcagtccatgcagccctgt
tccgggtcagaggtcaccaaggaggatggcacacgcccaaacctgctggttaaagtgaac
gcccaggtgaagggggataagaatggtgaagatgaaaaagggccgttataa
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