Coregonus clupeaformis (lake whitefish): 121551675
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Entry
121551675 CDS
T08357
Name
(RefSeq) tetratricopeptide repeat protein 30A isoform X1
KO
K19683
tetratricopeptide repeat protein 30
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121551675
Cilium and associated proteins [BR:
cclu03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
121551675
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_12
TPR_1
ANAPC3
TPR_7
TPR_8
TPR_6
TPR_16
TPR_CcmH_CycH
TPR_14
ARM_TT21_C
TPR_Slam
ARM_TT21_2nd
TPR_11
TPR_EMC2
DUF6891
NTS_TR130
DASH_Dad2
Motif
Other DBs
NCBI-GeneID:
121551675
NCBI-ProteinID:
XP_041720319
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All DBs
Position
35:36824583..36863973
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AA seq
651 aa
AA seq
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MTVTTIKDGEYTATVYKMIKDGRYGEAIHILSHELQKQMKSRAALSLLGYCYYHMQDFTN
AAECYEQLTQLHPEVEEYKLYYAQSLYGACAYPDAIKATFLLDNPTSHTKMIKLQAAIKY
GEEEYSGAKTLVEQLPQDDPDYEVDMGCLLYKEGEYEEACKKFMSAMQVLGYQPDLSYNI
GLCYYSMKQYAQALKFIGEIIERGIREHPELSVGMTTEGIDVRSVGNTLILHETALIEGF
NLKAAIEYQLKNCDAAQEALTDMPPRSEEELDPVTLHNQALMNMDKKPSEGFEKLAFLLQ
QIPFPPVTFGNLLLLYCKYEYFDLAADVMAENAHLTYKFLTPYLYEFLDAMLTCQTAPEE
AFRKFDEMNAKLTDQLRKLAKQVQEARLARDNEALKKTLQDYDEMVEKYIPVLMAQAKIY
WNRENYQMVEKIFRKSVEFCNEHDTWKLNVAHVLFMQENKYKEAIGFYEPIVKKHYDNIL
NVSAAVLANLCVSYIMTSQNEEAEELMRKIEKEEEELSYDDPDKKVFHLCIVNLVIGTLY
CAKGNYDFGITRVIKSLEPYNKKLGTDTWFYAKRCFLSLLENMAKHMIMIRDSVVQECIQ
FLEHCEVYGKTEPAMIEQPLEEDRMHIGKNTVTYESRLLKALFYEVIGWNQ
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgacagtgacaacgattaaagacggcgaatacactgccactgtctacaaaatgatcaaa
gatgggcggtatggagaggccatccacatcctcagccatgaactgcagaaacagatgaag
tcgcgggcagccctgtctctgctggggtactgctactaccacatgcaggactttaccaac
gcagcagagtgctatgagcagctgacccagctacaccccgaggtggaggagtacaagctg
tattacgcccagtctctgtacggggcctgtgcctaccccgatgccattaaggctaccttt
ctactggacaaccctaccagccacaccaagatgatcaaactgcaggcagccatcaaatac
ggagaagaggagtactctggagcgaagacattggtagagcagcttccccaggacgaccca
gactatgaggtggacatgggctgtctactctacaaggagggggagtacgaggaggcctgc
aagaagttcatgtctgccatgcaggtgctgggataccaaccagacctgtcctacaacata
ggtctgtgctactatagcatgaaacagtatgctcaggccctcaaattcatcggagagatc
atcgagagagggatcagggagcatccagagctgagcgttggcatgacgacagagggcatc
gacgtgagaagtgtgggcaacaccctgatcctacatgagactgccctcatagaaggcttc
aacctcaaggctgctatagaataccagctcaaaaactgtgatgcagctcaggaggccttg
actgacatgccgcccagatcagaggaggagctggacccagtgacgctccacaaccaggcc
ctgatgaacatggataagaagccatcggagggttttgagaaactagccttcctcctgcag
cagatcccctttcccccagtcaccttcggaaacctgttgttactatactgcaaatatgag
tattttgacctggctgctgatgtgatggcagagaatgcacacctcacctacaagttcctc
accccgtatctgtatgagtttctggacgccatgttgacctgccagacagctccagaggag
gccttcaggaagtttgatgagatgaacgccaagttgacagatcaactacgcaagctggcc
aaacaggtgcaggaagccaggctagcccgtgataacgaagccttgaagaagaccctccag
gactacgatgagatggtggagaagtacatcccagtgctgatggcccaggctaagatctac
tggaacagggagaactaccagatggttgagaagatcttccgtaagtcggtggagttctgt
aacgaacacgacacctggaagctcaacgtggctcacgtgctcttcatgcaggagaacaaa
tacaaggaggccattggcttctacgaacccatcgttaagaaacactacgacaacatcctg
aatgtcagtgctgctgtactggctaacctgtgtgtgtcctatatcatgaccagccagaac
gaagaggctgaagaactgatgaggaagatagaaaaagaggaagaggagctctcctacgac
gaccccgataagaaagtctttcacctctgtatagtcaacctggttatagggaccctgtac
tgtgccaaggggaactatgacttcggtatcacccgtgtcatcaagagtctggaaccgtac
aacaagaagctgggaacagacacctggttctatgctaagcgctgtttcctgtctctgctg
gagaacatggccaaacacatgatcatgatcagggactccgttgttcaggagtgtattcag
ttcctggagcactgcgaagtgtatggtaagacagagccagccatgatagaacagccactg
gaggaggacaggatgcacataggaaagaacaccgtcacctacgagtctcgcctgctcaaa
gcactcttctacgaggtcatcggatggaaccagtga
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