Coregonus clupeaformis (lake whitefish): 121551684
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Entry
121551684 CDS
T08357
Name
(RefSeq) xylosyltransferase 1-like
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
cclu00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
cclu01100
Metabolic pathways
Module
cclu_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
121551684
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
121551684
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121551684
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
121551684
Glycosyltransferases [BR:
cclu01003
]
O-Glycan biosynthesis
Glycosaminoglycan
121551684
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
121551684
NCBI-ProteinID:
XP_041720333
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All DBs
Position
35:37047733..37122070
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AA seq
928 aa
AA seq
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MVGNLCGRKLARRSKSALIVALTVLLVQTLIVWNFSTLDTREEGANSSREKRDQVGGINK
AYSQYPRSGLPKRHHQPPLGKAAVRHKQQPEGYHSWRPKEKVFLDSNNNENSVPKDFDTV
VDSNSNLGARSQSQRLRTAGNTAKHKPDKALTQGILGKALPNEVNEVNQQYPVPPQQLKP
HRPHPTKPSLSPSIKTSNQHQRHHQPRKSVTSAPVLGQRREQHQCEISGKEAISALSRAK
TRECRQQIAEVYCRHKERTLMPETVPRYCTLEGKANVNVLWDEGSVQTAPAVPVRIAFVL
VVHGRASRQFQRLFKAIYHTSHYYYIHVDQRSNYLHRQVGSLASKYSNVRVTSWRMSTIW
GGASLLTMYLRSMDDLLKMADWNWDFFINLSAADYPIRTNEQLVGFLTKYRDMNFIKSHG
RDNTRFIRKQGLDRLFFECDTHMWRLGDRKIPEGIAVDGGSDWFLLNRMFVDYIINSQDE
LVVSMKRFYAYTLLPAESFFHTVLENSAFCKSMVDNNLRITNWNRKLGCKCQYKHIVDWC
GCSPNDFKPPDLPRFQQTSRPTFFARKFEASVNQEIVTQLDSFLFGPYPQDTPGLQSYWE
NVYDETDSVVSLSDSQLTHYHAFTRMGLSRASMSLQGHADDDSCRYISRGHPVSVHLYFL
SDVFQGYLVRQYASNLATSQLETLETWVTHSNHFTLALTTKTLNRLQFAEVGTDWDAKER
IFRNFGSLLGPMEEPVAMQRWGRGQNITVTVVWVDPTNVIAATYDILVDGGAEYTHYRPP
LTLPLRPGVWTLRVLHHWNLLASTSFVVSPLEYHDQQPIRQEDTVKFHNGPVHNSYMEQS
FHGLNPILNLPVHLGQVEEAEFNASLTGAELQSWVDRLLAGVWSAADVCSQGPSSCPVMQ
RCRETGWSALSPDPKSDLGPPRGNGRIR
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggttggcaatctgtgcggtcgcaaactggctcgccgctccaaatcagcgctgatagta
gcgctgacagttctcctggttcagacgctgatcgtgtggaactttagtaccctggatacc
cgggaagaaggggccaatagtagccgggagaagagggaccaagtcgggggcatcaacaaa
gcctacagccagtacccccggagcgggctgccaaagaggcatcaccaacctccgcttggg
aaagcggctgttcgacacaagcaacaacccgagggctaccactcctggcggcccaaggaa
aaagtcttcctggatagtaacaacaatgagaactcggtccccaaagactttgacaccgtt
gtcgacagcaacagcaaccttggggcgcgttcacagtctcagcgcctgcgaacggcagga
aacacagccaagcacaaaccggacaaggccctaacgcaaggcattctgggaaaggccttg
cccaacgaggtcaacgaggtcaatcagcagtaccctgttcctccacagcagctcaaacca
cacagaccacaccccactaaaccttccctctctccctccatcaaaacatccaatcagcat
cagcgacatcaccaacccaggaagtcggtgacttcagctcctgtgttggggcagcggagg
gagcagcaccagtgtgagatcagtgggaaagaggccatctcggctctgtccagagccaag
accagggagtgtcgtcagcagatagctgaggtgtactgcagacacaaggagaggacactg
atgccggagaccgtccctcgatactgcaccctagaaggtaaggccaatgtgaacgtgctg
tgggatgagggctcggtgcagactgcccctgctgtgcctgttcgcatcgccttcgtcttg
gtggtccatggcagagcctctcggcagttccaacggctgttcaaggccatctaccacacc
tcacactactactatatacacgtagaccagcgttccaactacctccacagacaggttggg
tcgctagcgagcaagtactccaacgtgcgtgttacttcctggaggatgtccaccatttgg
ggcggggcgagcctgctcaccatgtacctgcgtagcatggacgaccttctcaagatggcc
gactggaattgggacttcttcatcaacctcagcgcagccgactaccctatcaggaccaat
gagcagctggtgggcttcctgacaaagtaccgggacatgaacttcatcaaatcccacggc
agagacaacacacggttcatccgtaagcagggtctggaccggctcttcttcgagtgtgac
acacacatgtggcgcctaggcgaccgcaagatcccagaaggcattgcggtggacggaggt
tctgattggttccttctgaaccgcatgtttgtggattacatcatcaactctcaggatgag
ctggtcgtcagcatgaagcgcttctacgcatacacactgctgcctgctgagtcgttcttc
cacacagtactagagaacagtgctttctgtaagagtatggtggacaacaacctgcgtatc
accaactggaacaggaagcttggctgtaagtgtcagtacaaacacatcgtagactggtgt
ggctgctcccccaacgacttcaaacctccagacctgccacgctttcagcaaacgtccagg
cctacgtttttcgcccgtaagtttgaggctagcgtgaaccaggagattgttacccagctg
gacagcttcctatttggcccttatccgcaggacaccccagggctccagtcgtactgggag
aatgtgtatgatgagacggacagcgtagtcagcctatcagacagccagctcactcactac
cacgccttcacacgcatgggcctatcacgggcctccatgtcactgcagggccacgccgac
gacgacagctgcaggtatatctccaggggccacccagtgtctgtccacctgtacttcctg
tcagacgtgttccaaggctacctggttcgtcaatacgctagtaacctagcaaccagccag
ctagagaccctagagacttgggtcacccatagcaaccacttcaccctggccctgacaacg
aaaacactcaacagactacagttcgcagaggtgggtacagactgggacgccaaagagaga
atcttcaggaacttcggaagcctcctgggccccatggaggagccggttgccatgcaacgc
tggggccgggggcagaacatcacggtaaccgtcgtctgggtggaccccaccaacgtcata
gccgccacgtacgacatcctggtggacggcggggcagagtacacacactaccgccccccg
ttaaccctcccgttacgacccggtgtgtggacgctacgcgttctgcatcactggaaccta
ctagcctccaccagctttgtggtttcacccctggagtaccacgaccagcaacctatacgc
caggaagacacagtgaagttccacaacggcccggtccataactcctacatggagcagagt
ttccacggcctcaaccccatcctcaacctccccgtgcacctaggacaggtggaggaggcg
gagtttaacgcatcactgacgggggcggagctccagagctgggtggaccgtctcctggcg
ggggtgtggtctgcggcagacgtgtgttctcagggtcctagctcgtgtcccgttatgcag
cggtgtcgggagacgggatggagcgcgctcagtcccgaccccaagtctgatctgggtccg
ccccgagggaacggacggattaggtag
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