Coregonus clupeaformis (lake whitefish): 121551701
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Entry
121551701 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: receptor-type tyrosine-protein phosphatase delta
KO
K06777
receptor-type tyrosine-protein phosphatase delta [EC:
3.1.3.48
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121551701
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121551701
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121551701
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
121551701
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
121551701
Cell adhesion molecules [BR:
cclu04515
]
Immunoglobulin superfamily
Type II RPTP family
121551701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
PTP-SAK
Tc-R-P
Interfer-bind
DSPc
V-set
Y_phosphatase3
PTPlike_phytase
PTP-NADK
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
121551701
NCBI-ProteinID:
XP_045070406
LinkDB
All DBs
Position
Unknown
AA seq
1950 aa
AA seq
DB search
MWITTYPMMLSARPGYFLLLLSFLLLADADSPPKFTRTPEDQTGVQGGVASFVCQATGDP
PPNIVWNKKGKKVQNQRFEVIDYEDGSGSVLRIQPLRTPRDEAVYECHASNPAGEITALC
SLSVLREDQLPSGFPTIDMGPQLKVVERSRTATMLCAASGNPDPEITWFKDFLPVNTTNN
NGRIKQLRSESFGGTPIRGALQIELSEEQDQGKYECVATNSDGTRYSTPANLYVRELREV
RRVPPRFSIPPADSEIMPGGNINITCVAVGSPMPYVKWMLGTEDLTPEDDMPIGRNVLEL
GDIRQSNNYTCVAMSTLGVIEAMAQITVKALPKTPGNPVVTERTATSITLTWDSGNPEPV
SYYIIQHRPKGSEDIYKEIDGIATTRYSVGGLSPYSHYDFRVAAVNTIGRGPASDSVEAR
TAEQAPSSPPRQVRGRMLSTTTAIIHWDGPEEANGQVVGYRVYYTDDNTLQVNQWEKLMV
RGANFITIQSLTPNKTYYIRVLAFTSVGDGPLSQDLQIIAKTGVPSQPSDFKGEAKSETS
ILLSWVAPPQSGPENLITGYELVYRRSDDNDEKKLNFDPTSSYLMKNLKLRSSYTFQLAA
RSKHGIESVYQRETQSKPSAPPQEVTCSSPSSTSILVSWAPPLAEFQNGIITGYSIQYSV
TEGGQQDXSQRVSDIPPESSQYLLENLEKWTEYGITVRALTEAGEGPESLQLLVRTEEDV
PSGPPRDVETEALNSSAVKVVWRAPAVERQHGQVRGYQVHYVKMNYGEPTGPNLIKDILI
DDSQWEYNESTEYEVVLGELQADTAYSVSVGAYTAKGDGARSKPQTLCTTLALPERPRLS
VSPTPAGMAQLQWLPPPSPPTPLLGYRLTFGRLDVLPPTVVEFPTKENSYTAQDIHKGAS
YTFRLSARNKIGYGEEAVIELTTLEDVPGGYPENILSEGASASSIRLAWKSVPLIEQNGK
IVKYSVRYRDVNGRGGNATREVGVAVPESSVTLEGLSADTVYDVRVCAFTAVGPGPYSPG
VQFRTQPLDVEVFAANFRVKAAMKNSVLLTWEIRDKTPSQPFTILYGKGQSVEVDGKQNQ
KMITGLQPETQYSFLLTNRGNSAGGLQHRVTVTTAPDVLRSKPTLVGKTNADGMVTVQLP
PVQTTTTVRGYYVVVVPLKKQRAGKFLKPWDNPDQMNLDELLKEINRTSVSQALRLRRQV
PASQSDPRAYISAHFKALPLEFTLGDGRSYGEFRNRPLQNGQEYVFFVLALIDLSDNTMY
STSPYSDPVTSNDVDPQPIVDEEEGLLWVVGPVLAVIFIVCIVIAILLFKSKPDRKRAEA
EGRKASFPCSKAMSSHHPTDPVELRRINFQTPGGYRISAFRGYKRLSSMASHPPIPISEL
ADHLERLKANDNLKFSQEYESIDPGQQFTWEQSNLEVNKPKNRYANVIAYDHSRVLLSSI
EGIPGSDYINANYIDGYRRQNAYIATQGSLPETFCDFWRLVWEQHTANIIMMTKLEEKSR
VKCDQYWPTRGTETYGLIQVTLLDTVELATYSVRTFALYKSGSSEKREIRQFQFTAWPDH
GVPEHPTPFLAFLRRVKACNPPDAGPMVVHCSAGVGRTGCFIVIDAMVERIKHEKTVDIY
GHVTLMRSQRNYMVQTEDQYAFIHDALLEAVACGNTEVPARNLYAYIQTLTKIEPAENVT
GMELEFKRLASAKAHTSRFVSANLPCNKFKNRLVNIMPYETTRVCLQPIRGVEGSDYING
SFIDGYRQQRAYIATQGPLAETTEDYWRMLWEHNSTIVVMLTKLREMGREKCHQYWPAER
SARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTVRQFQFTDWPEQGVPKSGEGFID
FIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDIFQTVKMLRTQ
RPATVQTEDQYQFCYRAGLEYLGSFDHYAT
NT seq
5853 nt
NT seq
+upstream
nt +downstream
nt
atgtggattactacgtatcccatgatgctatctgccaggccgggctacttcctgctactg
ctcagcttcctgctcctcgctgacgcagactcgccaccaaagttcacacggaccccagag
gaccagaccggggtgcagggaggggtggcctccttcgtctgtcaggccactggagacccc
ccgcccaacatagtctggaacaagaagggcaagaaggtccagaaccagaggtttgaggta
attgattatgaggatggttctgggtctgttctgaggatccaaccactgaggactcctaga
gatgaggctgtctatgagtgccacgcctccaacccggcaggagagatcactgcactctgc
agcctcagcgtgttacgggaggaccagctcccctcaggtttccccaccatagacatgggt
ccccagctgaaggtggtggaacgttctagaacggccacgatgctgtgtgctgctagcggc
aaccccgacccagaaatcacctggtttaaagacttcctccctgtcaacaccaccaataac
aacgggcgaatcaaacagctccgctcagagtcctttggtggcacgcctataagaggtgcc
ctccagatagagttaagtgaggaacaggaccaggggaaatatgagtgtgttgccaccaac
agcgatggaacacgctactccacccccgctaacctatacgtcagagagctcagagaagta
cgcagggtgccccccaggttctccatccccccagcagacagtgagataatgccaggaggc
aacatcaacatcacctgtgtggctgtgggctcccccatgccctacgtcaagtggatgcta
gggacagaggacctcaccccggaggatgacatgcctatcgggcggaatgtcctcgagctg
ggagacatacgccagtctaacaactacacctgtgttgccatgtcgacgctgggggtgatc
gaggccatggcgcagatcactgtgaaagccctgcccaagaccccaggtaacccagtggta
acagagagaactgccaccagcatcactctgacctgggactcaggcaaccctgaacctgtg
tcctactatatcatacagcaccgtcctaaaggatcagaagacatctataaggagatagac
ggtatagcaaccacacgctacagtgtaggtggtctcagtccatactctcactatgacttc
cgggtggcggcggtcaacaccatcggcagaggtccagccagcgactctgtagaggccaga
acagcagaacaggctccgtcatcaccaccacgacaggtcagaggtcgtatgctgagtacc
accacagctataatccactgggacggacctgaggaggctaacgggcaggtggtggggtac
agagtctactatacagacgataacacactgcaagtcaaccagtgggagaagctgatggtc
cgtggtgctaatttcatcaccatccagagtctgacccccaataagacctattacatcaga
gtcctggcctttacctctgtaggagacggacctctctcccaggacctgcagatcatagcc
aagactggagttccgtctcagccatcagactttaaaggagaggccaagtcagagaccagt
atattgctgtcctgggtagctcctccacagagtgggcctgaaaacctgatcactggatat
gaactggtctacaggaggtctgatgacaacgacgagaagaagctgaattttgaccccacc
tcctcctaccttatgaagaatttgaagcttcgttcctcctacaccttccaactggcagca
cgtagcaaacacggcatcgagagcgtataccaacgagagactcagtccaaaccctcggcc
cctccccaggaggtcacatgctccagccccagctccaccagcatcctggtaagttgggct
ccgcccctggcggaattccagaacggaatcataacgggatattccatccagtattctgtc
acggaagggggacaacaggacnnttcccagcgagtcagcgacattccaccggaaagctct
cagtaccttctggaaaacctggagaaatggacggagtatggaatcacggtccgagcgcta
acggaagccggagaaggaccggagagtctacaactactagtacgcacagaggaagatgtt
cccagtggtcctccgcgcgacgtggagacggaggcgctgaactcgtcggcggtcaaggtg
gtgtggcgggcaccggcggtggagcggcaacatggtcaggtcagaggttaccaggtccac
tacgtcaagatgaactatggagagcccactggacccaacctcatcaaggatatactcata
gacgactcacagtgggaatacaatgaatcaacagaatatgaggtggttctaggggaactc
caggctgatactgcctactctgtgtctgtgggggcgtacaccgccaagggagacggggca
cggagcaaaccccaaactctctgcactaccctcgcactcccagaacgccccaggctctca
gtaagtcccaccccggcgggcatggctcagctccagtggctgcctccacccagcccccct
acccctctcctggggtaccgtctaaccttcggacgcctggatgtcctcccccccaccgtg
gtagaattccccaccaaggaaaactcctacactgcgcaggatatccacaagggggcgtcg
tacacgttccgactctccgcccggaataagattggatacggagaggaggcagtgatcgag
ttgactactctggaagacgttcccggaggatacccagaaaatatcctatctgaaggcgcc
tcggcatcctccatacggctagcttggaagtctgtcccgcttatcgaacaaaacgggaag
attgtgaagtattcggtgcggtaccgggatgttaacggtagaggtgggaatgctaccagg
gaggtgggggtggcggtaccggaatctagcgtgacgttggaagggttgagcgctgacaca
gtgtatgacgtcagagtgtgtgcgttcacggcggtagggccggggccgtatagtcccggc
gtccagtttaggacgcaaccgctggatgtggaagtgtttgctgctaacttcagagtgaag
gctgccatgaagaactcagtcctgctgacctgggagatacgagacaaaaccccctcccag
ccttttactatcctgtatggtaagggtcagagtgtggaggtggatggtaaacagaaccag
aagatgataacaggtctacagccagaaacccagtactccttcctgttgactaaccgtggc
aacagtgccgggggactacagcaccgtgtaaccgtgacaaccgctccagacgtgctgcgc
tccaaacccacgctggtggggaagaccaacgcagacgggatggtgacggttcaactaccg
cccgtacagaccaccactactgtcaggggttactatgtggtggtggttcctctgaagaag
cagagagcagggaagttcttgaagccctgggacaacccagaccagatgaacctcgacgag
ctcctgaaagagatcaacaggaccagtgtgagccaggcgctgcgtctccgtcgccaggtc
ccggccagccaatcagatcccagggcctatatctccgcccactttaaggccctccccctg
gagttcaccctgggtgatgggaggagctatggggagttccggaaccgccccctgcaaaat
ggacaggaatatgtgttcttcgtgctggcgctgatagacctgtctgataataccatgtat
tcaaccagcccttactctgaccccgtgacctccaatgacgtggaccctcagccaatcgta
gacgaggaggaggggcttctgtgggtggtggggccggtactggctgtcatcttcatcgtc
tgcatcgtcatcgccatcctgctcttcaagagtaaaccagacaggaaaagggctgaggca
gagggaaggaaggctagtttcccctgcagcaaggccatgtcctctcaccatcccactgac
ccagtggagctacgcagaatcaacttccagaccccaggaggttaccgtatatcagctttc
cgcggctacaaacgattgtcaagcatggctagtcacccacctatccctatctctgagctc
gctgatcatctagaacgcctgaaagccaacgacaacctgaagttctctcaggagtatgag
tccattgaccccggccagcagttcacctgggaacagtctaacctggaggtcaacaagcca
aagaaccgctatgccaacgtcatcgcctacgaccactccagggttctactgtccagtata
gagggtatcccaggcagtgactacatcaatgctaactacattgatggctaccgtcgtcag
aacgcctacatcgcgacgcagggctctctccctgagaccttctgtgacttctggagactg
gtgtgggaacagcacacggccaacatcatcatgatgaccaagctagaggagaagtcacgg
gtaaagtgtgatcagtactggcctaccagaggaacagagacatacggtctgatacaggtt
actctgctggacactgtagagctggctacatactctgtcaggaccttcgctctctacaag
agtggctccagtgagaagcgtgagattcgtcagttccagtttacagcctggccggaccac
ggggtcccagaacaccccaccccgttcctggccttcctacgacgggtcaaggcctgcaac
ccgccagacgcaggacctatggtcgtacactgcagtgctggagtgggccggactggctgt
ttcatcgtgattgacgccatggtggagcgaatcaaacacgagaagacggttgacatctac
ggtcacgtgaccctcatgaggtcccagcggaactacatggtgcagacggaggatcagtat
gcctttattcacgacgcgctgctggaagccgtcgcctgtggcaacactgaggttccggcg
cggaacctttatgcctacatccagacactgaccaaaatagaaccggcggagaacgtcacg
ggcatggaactggagttcaagcggttggccagtgcgaaggcccacacctccaggtttgtg
agtgccaacctgccgtgtaacaagttcaagaaccgtctggtgaacatcatgccctatgag
accaccagggtctgtctgcagccaatcagaggagtggaggggtcagactacatcaacggc
agcttcatagacggatacaggcagcagagggcttatatagccacccagggcccgctggct
gagactactgaggactactggagaatgttgtgggaacacaactctaccatagtggtcatg
ttgactaaactaagggagatgggacgggagaagtgccatcagtactggccagcagagcgc
tcagccaggtaccagtactttgtagtggaccccatggccgagtacaacatgccccagtac
atcctacgagagttcaaagtcaccgatgccagagacggccagtctcggacggtccgtcag
ttccagttcactgactggccggagcaaggagtgccaaagtcaggggaggggttcattgat
ttcattggccaggtgcacaaaactaaagagcagtttggccaggacggaccaatcacggtg
cactgtagtgctggtgtggggaggacaggggtcttcatcactctaagtatcgttctggag
aggatgagatatgaaggagtagtggacatcttccagactgtcaagatgctgcgaacacag
agacctgctaccgttcaaactgaggaccagtaccagttctgttaccgggccggtctggag
tatctgggtagcttcgaccactatgcaacataa
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integrated database retrieval system
