Coregonus clupeaformis (lake whitefish): 121551732
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Entry
121551732 CDS
T08357
Name
(RefSeq) TANK-binding kinase 1-binding protein 1-like
KO
K12652
TANK-binding kinase 1-binding protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
121551732
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Gene cluster
GFIT
Motif
Pfam:
TBD
Zn-C2H2_12
Seryl_tRNA_N
DUF3678
Cnn_1N
ADIP
Lysozyme_like
CENP-F_leu_zip
Rad50_zn_hook
DUF4200
DUF2203
GAS
DUF3584
Fib_alpha
UPF0242
Motif
Other DBs
NCBI-GeneID:
121551732
NCBI-ProteinID:
XP_045067086
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All DBs
Position
35:15442777..15458610
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AA seq
611 aa
AA seq
DB search
MESLFGGELGLLGGGEGLRDDGCSLGSGVNWSASPIQDDMYPSHFALAAAYHDIKTRLAS
LERENSSIKRKLKNYEVKFPMISEFEEERTLQCCSCEPKETSLLQSETTNLQQRVNSLTQ
ELQKSKEREERLEDVIQAYEKIHMEKSNVQRDLDKMTTLAEQHMGRICGLESALRQREGS
LQKLSAQLHSKNIHYLQLHTSLDVPRERNGRGPTLQSSRSLDAVSDLKLQRLEAELEGAR
QQAQGACQREKEMKEELQRLQTEIRELQQEVQRQQEVTTPCEHCDVEWIKKAGDEQVNLA
LAYTELTEELGRVRGLAVKQTEILRKASHEQMVLRHSPAPQRRSPASQRPSPDRLHPHPS
PSPPLSPSSPPSGPASYSPTGLSYSPTGPASYSCRPTSQRLRARFQGRRSYSEVADSSAH
QRPPPRLLRDPVSTLPKPRNMEESGAYSRPPRVSLGGGGGGNSLSSSPHHHALGLGFPLA
AEGRHFCHLEDPPAPTPLVTPPQSSDDEEEWRCPSPVSSPPRTLGAMGVSSREPPPCPSF
LAPKGPANLTCHLPGYLNADHAQSWPSINLWMETEENDARSCPLCQLTFPTGYPDDALIK
HIDTHLENSKI
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggagtctctcttcgggggcgagctaggcctcctgggcgggggcgaggggctgagggat
gatggctgcagcttggggtcgggggtcaactggtcggcctcacccatccaagatgacatg
tacccctcccacttcgccctggccgccgcctaccatgacatcaagacacgattggccagc
ctggagcgagagaacagcagcatcaagaggaagctgaagaactatgaggtcaagttccct
atgatcagtgagtttgaggaggagaggactctacagtgctgctcctgtgaacccaaggag
accagcctactgcagtcggagaccaccaacctgcaacagagagtcaactcactcacacag
gagctccagaagagtaaagagcgagaggagagactggaggatgtgattcaggcctatgag
aagatccacatggagaagagtaacgttcagagagacctggacaagatgacgacactagca
gagcagcacatggggcgtatctgtggtctggagtcagctctgaggcagagggaggggtcc
ctgcagaaactcagtgctcagctgcacagcaagaacattcattacctacagctacacacc
agtctggacgtgcctcgcgagcggaatgggcggggtccgaccctgcagagctctcgtagt
ctggacgccgtgtccgacctgaagctgcagcggttggaggcggagctagaaggggcgcgg
cagcaggcccagggggcatgtcagagagagaaggagatgaaggaggagctacagaggctg
cagacagagatcagagagctgcagcaggaagtacagagacagcaggaggtgaccacaccc
tgtgagcactgtgatgtggagtggatcaagaaggcaggagatgaacaggtgaacctggcg
ttggcctacactgagctgacagaggagctgggtcgtgtgagaggtctggctgtcaaacag
actgagatcctcaggaaggcatcccacgagcagatggtcctaagacactccccagccccc
cagcgtcgctccccggcctcccaacgcccctccccagaccgcctccaccctcacccctct
ccttctcctcccctctcaccttcctcacccccttctggccccgcttcctactcccccact
ggcctctcttactcacccaccggcccagcatcctactcctgccggccaaccagccaacgg
ctacgtgcccgcttccaggggcgccgcagctactcggaggtagccgactcatctgcccac
cagaggcccccgcctaggctgctccgtgacccggtctccaccctgcccaagcccaggaac
atggaggagtctggggcctactcccgcccgcccagggtttccctgggaggaggaggagga
ggaaacagcctgagcagtagtccccaccaccatgccctggggctgggcttccctctagct
gcagaggggcgccacttctgtcatttggaggatcccccggcccccaccccactggtcacc
ccgccccagtcatctgacgatgaggaggagtggaggtgcccatccccggtctccagtcct
cccaggacactgggggccatgggggtaagctcacgggaaccccctccctgcccctccttc
ttggccccaaagggcccggctaacctcacctgccacctgccagggtacctgaacgcagac
catgcccagtcctggccctccatcaatttgtggatggagacggaggagaacgacgcccgg
agctgcccgctgtgtcagctgaccttccccactggttaccctgacgacgccctcatcaaa
cacatcgacacgcacctggagaacagcaagatctaa
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