Coregonus clupeaformis (lake whitefish): 121551751
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Entry
121551751 CDS
T08357
Name
(RefSeq) myoferlin
KO
K22125
myoferlin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121551751
Membrane trafficking [BR:
cclu04131
]
Endosome - Lysosome transport
Others
Ferlins
121551751
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Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerA
FerI
PI3K_C2
PTEN_C2
Pex24p
Motif
Other DBs
NCBI-GeneID:
121551751
NCBI-ProteinID:
XP_041720419
LinkDB
All DBs
Position
35:9190436..9260553
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AA seq
2067 aa
AA seq
DB search
MLRVVVETAKGIPKKKLRIPDPIAAIVFRGEKKKTKAIDSELNPVWNEVLEFDLKGSPLD
ASSFIDVIVKDYETIGKDKFIGSAKISLQDLAHGHTKSFPAKNLSLVNEKKQDTGATINL
MIVYEPPANTTPNLNNQTDEDQSYGDTGQFNITNMWHIISLCGGEEGEDGEEVSLAGQVG
TPGAPPTPGQPGNPNQRPVRTSRKRHRALANKPQDFQIRVRVIEGRQLPGNNIKPVVKVN
VCGQTHRTRIRRGNNPFFDEIFFFNVNMLPSELLDDYISIRVYDSYSLRADSLMGEFKLD
VGYIYDEPAHAIMRKWLLLSDPDDSSSGAKGYLKVSLVIVGTGDEPPTEKRERNEELDDI
ESNLLVPAGVTLRLVTLNLKVYRAEDMPQMDDAFVQTVKQVFGGEGDKKNLVDPFLEVSF
AGKKLCTKIVEKNANPEWNQLINLQVKFPSMCESIKLTVFDWDRLTRNDVIGTTFLNLTK
IASSGGEIEDTPAENCTTLSSEVSSGQAEVGFLPAFGPCYLNLYGSPREFTGLPDPYEEL
NFGKGEGVAYRGRVLIELSTQLEGKADRKLDNISSDDILVAQKYQRRRKFSLCAVFHSSC
MLQEPGEPIQFEVSIGNYGNKLDSTCMPLASTTQYSCAVFDGNHYYYLPWADTKPVVILT
SFWEDISHRLDSVNIILCIADRLESNLTSLRTAILAKASEAHLAEIWLKLINHMIEDLSS
FQVPELEGRPNLTALDVQIKKLRDSAVASIREMAKRMKEEATDVIATLTDIEDWLERLKQ
LAEEPQNSMPDVVIWMLRGERRVAYARLPAHQILYSTYSEQACGKYCGRTQTIFMQYPMD
KNKGVKIPVQLRVNMWLGLSAHEKKFNSFSEGTFSVFAEMYENQAQVFGKWGTTGLVCRH
KFSDVTGKVKLKQERFMPPRAWEWEGEWFVDPEKCLLTEADAGHTEFTDEVFQSETRFIG
GEWKPAAEPFTDVNGQKSQSPGEIECPAGWKWEDDWSFDSNRAVDEKGWEYGITIPPDDK
PKSWGAAEKMYHIHRRKRLLRPRRKIADTKAAPERRDPGEGWEYSSLIGWKFHRKERSSD
TFRRRRWRRKMALSDGMGASAIFRLEGALGVDVDEKASKKDAARLFGANTPTVSCHFDRS
YTYHLRVYVYQARNLIAMDRDSFSDPYAHVSFLHVSKTTEVIRATLNPIWDQTLIFNDIE
IYGDPQTIALNPPNVVLELYDSDQVGKDEAMGRCTCTPVVKLDPSTAVSPKLLWFPVTKK
GRNAGEMLVAAELLLKDKANESDLPLVPPRRGTTLYMVPQGIRPVVQLTAIEILAWGLRN
MKTYQLATITSPSLIVECGGEVVQTAVIKNIKKNPNFPGSVLFFKVLLPKEEMYTPPIVL
KVIDHRPFGRKPIVGQCTIYSLEEFRCDPYVTNAEVAMSAKVAMMAATQGDIIINMEDRP
ILNTELHKEKEEEAVDWWSKFYASMGEHEKCGPYLKKGYDTLKVYEGELEEVPEFRGLTD
FCKTFRLQRGKTEDEEDDPSVVGEFKGSFRVYPLSDDPEVPAPPRQFRELPESGLQECLV
RIYVVRCMDLQPKDNNGMCDPYIKISLGKKTKDDRDDYKPNTLNPEFGRMFELSCFLPQD
KDLKIAVYDYDLLSRDEKVGETVIDLENRLLSRFGSYCGLPQSYCISGTNQWRDQLKPSQ
ILENLARLRGIPPPHNTADGSTLSFGGRDYSLLDFEDNRVIHQHLGPARERMALHVLRKQ
GLVPEHVETRTLYSSYQPTLSQGRIQMWVDIFPKSLGLPGPPCHITPRQAKKYFLRAIVW
NTTDVILDETSITGEEMSDIYVKGWMPGMEEDKQKTDVHYRSLDGDGSFNWRFVFGFDYL
PAEQLCLISRKEHFWNLDQTEFRTPPKLIVQIWDNDKFSLDDYLGTVELDLLHLIPPTKT
PEKCSLKMLPGVTGSTPSKQPQPNSLFSQKSVRGWWPCMIEQDGKHILGGKVEMTLEIVE
EREVEERPAGKGRDEPNMNPKLDFPNRPDTSFFWFTSPCKTMKFIIWRRFKWIFIGLIVL
LLVLLFLGILLFSLPNYISMKIVKPFS
NT seq
6204 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgcgtcgtagtggaaactgccaaaggcatccccaaaaagaaactcagaatccca
gatcccatagcagcgatagtgttcagaggtgaaaagaagaaaactaaagcaattgatagt
gaactcaatcctgtgtggaatgaagtgcttgagtttgacctaaagggctccccattggat
gcgtcctcctttatagacgtgattgtgaaagactatgagactatcggcaaagataaattt
attggctcagctaagatctctctacaagacctggctcatggtcacaccaagtccttccca
gcaaagaacctgtccctggtcaatgagaagaaacaggatactggggcgaccattaatttg
atgatagtgtatgagccgccagctaacaccactcctaaccttaacaatcaaactgatgaa
gaccagtcgtatggggacacaggtcagtttaacataacaaatatgtggcacatcatctct
ttgtgtgggggggaggaaggggaggatggggaggaggtatccctcgcgggtcaggtgggg
acccctggagctccacccacacctggccagcctggtaaccccaaccagaggcctgtccgg
accagccgcaagagacaccgggccctagccaacaagccccaggacttccagattcgtgtt
cgagttatcgagggccgacagttgccaggcaacaacatcaaaccggtcgtcaaagtgaat
gtgtgcggacaaacccacagaaccaggatcagacgaggcaacaaccccttctttgatgag
attttcttcttcaatgtcaacatgctgccttcagagcttttagatgactatatcagtatt
cgggtctatgattcctactccctcagagcagacagtctaatgggggagttcaagttggat
gttgggtacatctacgacgaacctgcccatgccataatgaggaagtggcttctcctgagt
gaccctgatgactctagctcgggggccaaaggttacctgaaggtcagcctggtgatcgtg
gggacaggagacgagccaccgactgagaagagagagcggaacgaggagctagatgacata
gagagtaatctgttggtgccggctggggtaacactcagattggtcactctcaacctgaag
gtgtaccgtgcagaggacatgcctcagatggatgatgcgtttgtgcagactgtgaaacaa
gtatttggaggggaaggcgataagaaaaacttagttgatccatttctggaggtcagcttc
gctggcaagaagctgtgcaccaaaattgtcgagaaaaatgccaatcctgagtggaaccag
ctgatcaaccttcaggtcaagttcccatccatgtgtgaaagcatcaagttgactgtattt
gactgggatcgtctgaccaggaatgatgtgataggaaccacatttctaaatctgaccaaa
atagcctcatctggtggtgagattgaagatacacctgcagaaaattgcaccactctgtca
tctgaagtgagcagtgggcaggcagaggtgggtttcctcccagcgtttgggccttgttac
ctaaacctgtacggcagtcccagggagttcactggcctcccagacccatacgaggagctc
aactttggcaagggtgaaggggtggcatacaggggcagagtcctcattgagctctccact
cagctggagggcaaagctgacaggaagctggacaacatctccagtgatgacatcctggtg
gcccagaagtaccagcggaggaggaagttctcgctgtgtgccgtgttccacagctcctgc
atgctccaggagcccggtgagccaatccagttcgaggtcagcatcggtaactatggcaac
aagctggactccacctgcatgccgctggcttccacaacccagtacagctgtgctgtgttt
gacggtaaccactactattacctgccctgggctgacaccaaacctgttgtcatcctcaca
tcgttctgggaagacatcagccacagattagattcagtcaacatcatcctctgcatcgca
gatagactggaatccaacctcacgtctttgagaacagccatccttgccaaagcctcagag
gcgcacttggctgagatctggctcaaactcataaaccacatgattgaggacctgagcagc
tttcaggtaccagagcttgagggcaggcccaacctgacggcgctggatgtccagattaag
aagctgcgtgactcggcggtggccagcatcagagagatggccaaacgcatgaaggaggag
gccaccgatgttattgccactctgacagacatcgaggactggctggagagactgaaacag
cttgcagaggagccccagaacagtatgcctgacgtggtgatctggatgctgcgtggagag
aggagggtggcgtatgcccgcctcccagcccatcagatcctctactccacctacagtgag
caggcctgtgggaaatactgtggcaggacacagaccatcttcatgcagtaccccatggac
aaaaacaaaggcgtgaagatccctgtccagctccgtgtcaacatgtggctggggctctct
gcccacgagaagaagttcaacagcttctcagagggaaccttcagcgtgttcgcagaaatg
tatgagaaccaggcccaggtttttgggaagtggggcaccacagggttggtgtgccggcat
aagttctctgacgtgacagggaaggtgaagctgaaacaggagcgcttcatgccccccagg
gcgtgggagtgggaaggcgagtggttcgtcgaccccgagaaatgcctgctaacagaggca
gacgcggggcacacagagttcacagacgaggtcttccagagcgagacacgtttcattggt
ggggagtggaagcctgctgccgagcccttcacagatgtgaatgggcagaagagccagagt
ccaggggagatagagtgtcctgctggctggaagtgggaggatgactggagcttcgacagc
aacagggctgtggatgagaaaggttgggagtatggcatcaccattccccccgatgacaag
cccaagtcctggggagcagcagagaagatgtaccacatccaccgcaggaagagactctta
cgaccacgcaggaaaatagcagacactaaagcagcacctgagaggcgggatcccggtgaa
ggctgggaatactcgtccttgattggctggaagttccacaggaaggagcgttcgtctgac
acattccgccgtcgccgctggagacggaagatggctctgtcagatggtatgggagcgtca
gccatcttcagactggagggggcgctgggggtagatgttgatgagaaggccagtaagaag
gacgcagccagactgtttggtgccaacacacccaccgtttcctgtcattttgacaggtcg
tatacgtaccatctgagggtgtatgtctaccaggccaggaatctcatcgccatggacagg
gacagcttctcagatccctacgcccatgtgtccttcctccatgtcagtaagaccacggag
gtcatcagagccactctgaacccaatttgggaccagaccctcatctttaatgacatcgag
atctatggagacccccagaccattgcactcaacccccccaacgtggtgctagagctctac
gacagtgaccaggtgggtaaggacgaggccatgggtcgctgtacgtgcacccctgtggtg
aagctggaccccagcacggcggtctcccccaaactgctgtggttccccgtcaccaagaaa
ggccgcaacgctggagagatgctggtggctgccgagctattgctgaaagacaaggccaat
gagagtgacttgcccctggtgcccccaagacgaggaactacgctctacatggttccccag
ggaatcaggcctgtcgtacagcttaccgccattgagatcttagcctggggtctgaggaac
atgaagacctaccagttggccacgatcacctctcccagtctcatagtggagtgtgggggg
gaggtcgtccagacggctgtcatcaagaacatcaagaagaaccccaatttccccggatct
gtcctcttctttaaagtgctcctacccaaagaggagatgtacacccctcccatcgttctg
aaggtgatcgaccaccggcccttcggcaggaagcccattgtgggccagtgtaccatttac
tccctggaggagttccgctgtgacccctacgtcaccaatgctgaggtggccatgtctgcc
aaagtggccatgatggcagcaactcaaggagacatcatcattaacatggaggataggccc
atccttaatactgagctccacaaagagaaggaggaggaggcagttgactggtggagtaag
ttctatgcctctatgggagagcacgagaagtgtgggccgtacctcaaaaaaggatacgac
accctaaaggtgtatgaaggtgagctggaggaggtcccagagttccgagggctgacggat
ttctgtaaaacgttccgactgcagcgggggaagactgaggatgaggaggatgacccctca
gtggtcggagagttcaagggctcgttccgggtgtaccccctatctgatgacccagaggtg
ccagccccgccgcgccagttcagagagctgcctgagagcgggttgcaggagtgcctggtc
aggatctacgtggtgcgatgcatggacctgcagcctaaagacaacaatggcatgtgtgac
ccttacatcaagatctctttggggaagaaaacaaaagatgacagagatgactacaaacca
aacacccttaatccagagtttggcaggatgtttgagctgtcctgtttcctccctcaagac
aaagacctgaagatagccgtgtacgactatgacttgctcagccgagatgagaaagtggga
gagacggtcattgacctggagaacagactcctctctcgcttcggctcctactgcggcctg
ccacagtcctactgcatctcagggaccaaccagtggagggatcagctgaagccctcccag
atcctggagaacctggccagactgagagggatccctccaccccacaacaccgctgacggc
agcacgctctccttcggggggagagactacagtctgctggactttgaggacaacagagtc
atccaccagcacctgggtccagccagggagaggatggccctgcatgtcctcaggaaacag
ggtctggtaccagagcatgtggagaccaggactctctacagttcttaccaacctacactt
tcccagggaaggattcagatgtgggtggacatcttcccgaagagcctgggtttaccggga
cctccctgccacattactccacgccaagccaagaagtacttcctgcgggctatcgtctgg
aacaccactgatgtcatactggatgagaccagcatcaccggagaggagatgagtgacatt
tatgtcaaaggatggatgcctggtatggaggaggacaagcagaagacagacgtccactac
agatccctggatggtgacggcagcttcaactggcgatttgtctttggctttgactacctg
cccgcagagcaactgtgcctcatttccaggaaagagcatttttggaatctggaccaaaca
gagtttcggacgcccccaaagttgatcgtccagatttgggacaatgacaaattctcactg
gatgactacctgggcacagttgagttggacctgctccatctgatcccccctaccaagacc
cctgagaaatgcagtctgaaaatgttgccaggggttacaggctccaccccttccaaacaa
ccacagcccaactctctgttctcccagaagtctgtgcggggctggtggccttgtatgata
gagcaggacgggaagcacatcctgggtgggaaggtggagatgaccctggaaatagtggaa
gagagggaggtagaagagaggcctgctgggaagggccgggacgaacccaacatgaacccc
aaactagactttcctaatcgccccgacacttccttcttctggttcaccagtccatgcaag
accatgaagttcatcatatggcgcagattcaaatggatcttcattggtttgatagtcctc
ctgcttgtgctcttgttccttgggatcctgctgttctccctaccaaactacatctcaatg
aaaattgtgaagcctttctcttag
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