Coregonus clupeaformis (lake whitefish): 121551765
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Entry
121551765 CDS
T08357
Name
(RefSeq) volume-regulated anion channel subunit LRRC8D
KO
K22038
volume-regulated anion channel
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121551765
Ion channels [BR:
cclu04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
121551765
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_1
LRR_R13L1-DRL21
LRR_LRWD1
LRR_9
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
121551765
NCBI-ProteinID:
XP_045068322
LinkDB
All DBs
Position
Unknown
AA seq
892 aa
AA seq
DB search
MFSLSELASPSERQGSSKLLKPWWEVFMEYLVVLMLMVSVLSGTLLLSRDRVVCLPLDLA
TTPTNQSTSSSSGAVPQPHPPNRPPNKPPPLPANPWSPARGRRTHLDYQQYVYISQVCYH
EALPWYSRFFPYVALLQSLVLLASGCFWFHFPLTSARIEHFLAILAKCCESPWTSRALSH
AARQEEGGEETGPQDLQMPPPTLLSSPSIPRNRQSSLDSGTDSPLLVRSDSASTATPPSP
CPSTLSRTSSLSSVSLSRARVPASKSPVVLDGSRRVASLDRSDGEQARALFERVRRFRSH
CENSEVIYKVYLAQTVFKLLLVVLIVGYTTPLMGSISFTHTCLPQAHALTGYSAFECTHA
LASVLHKLLLAYISLVGLFGLLSLYTLSWILHSCLRQYSFNKLRELGSMRDVPDLCNDLA
FLLHMADQYDPLLAQRLSVFLSPVSETRLLEESLERRWGAERLRSMTTVDPEGRPLLQLV
ALPRLPPALFTLSQLVVLKLELITDAKLPAQVANMTSLRELHLYHCTAAMQPGALVVLQE
RLEALHLTFTQAAEIPGWVYSLRGLQQLHLSGRLGCEGGVGHGWALGSLRQLRHLRVLVL
RGMLQRVPGELGEVAGSLVRLEIHNEGSRLLVLTGLRRVAGLTELQLQDCHLERLPSALL
ALTSLRTLDLQHNSLRTLEELLGLAHLRRLSCLRLAHNRILALPASVGVLRALELLDLGY
NQLQSLPPALFNLHHLRRLLLAGNLLDKLPAEVGALTFLTELDLSGNRLESLPPELFSRC
LELRSLNVSHNSLGSLPPGLSNLSQLSRLDLRSNSLEELPMELGFCSGLHGEGLLVEDWL
LHALPRHLKEFLTQPGSPTGKSLESHSRPDSDSFPYFSATQWSFSSALESRI
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcctgtcagagctggcctctccgagtgagcggcagggcagctccaagctgctg
aagccctggtgggaggtcttcatggagtacctggtggtgctgatgctcatggtgtctgtg
ttgtcaggcaccctgttgctgtctcgagacagggtggtgtgtctccccctggacctcgct
accacccccactaaccagagcacctcctccagcagtggtgccgtccctcaaccgcacccc
cctaacaggccccccaacaagccaccccccctaccagccaacccctggagccctgctagg
ggcaggcgcacccacctggactaccagcagtacgtctacattagccaggtgtgctaccac
gaggccctgccctggtactcccgcttcttcccctatgtggctctactccagtccctggtg
ctattggccagcggttgcttctggttccacttccccctcacctctgcccgcatagagcac
ttcctggccatcctggccaagtgctgtgagtcgccctggacctcccgtgccctgtcccat
gccgcccgccaggaggagggaggggaggagacaggaccccaggatctccaaatgcctcct
cctactctcctgtcttcaccctccataccccgcaaccgccagtctagcctggactcgggc
acagacagccccctgctggtaagatcggatagcgcgtccactgcaacccctccctcgccc
tgcccctccactctctcccggacctcctccctgtcctccgtgtctctgtcccgggcccgt
gtcccggcttccaaatcccctgtggtgctggatggttcacggcgggttgccagtttggac
cggagtgacggagaacaggccagggcactgttcgagagggtgcgccgcttccgctcccac
tgtgagaactctgaagtaatctacaaggtgtacttggcccagacggtgttcaagctgctg
ctggtggtgctgatagtgggctacaccacccctctgatgggctcgatctcgttcacccac
acctgcctgccccaggcccatgccctgactggctacagtgcctttgagtgtacccatgcc
ctggcctcagtcctccacaagttgctgctggcctacatcagcctggtggggctgtttggc
ctgctgagcctctacaccctcagctggatcctccacagctgcctgcgtcaatactccttt
aacaaactgagggagctgggctccatgagggatgtccctgacctgtgtaatgacctggcc
ttcctgttacatatggctgaccagtacgaccccctgctggcccagcgcctttccgtcttc
ctgtcacccgtcagcgagacacgcctgctggaggagagcctggagaggcgctggggggcc
gagaggctgcgctccatgaccacggttgaccccgagggacggcccctgctgcagctggtg
gccctgccgcgcctgccccccgccctcttcaccctcagccagttggtggtactcaagctg
gagctcatcacggacgccaagctccccgcacaggtggccaacatgacctcactcagggag
cttcatttgtaccactgtactgcagccatgcagcctggtgccctggtggttctgcaggag
cgtctggaggccctgcacctcaccttcacccaggctgcagagatccccggctgggtctac
tctctccgcggcctgcagcagctgcacctgtctggccggttgggctgtgagggcggggtg
ggccatggctgggccctgggaagcctccggcagctccgtcacctccgtgtgctggtcctg
aggggcatgctgcagcgtgtacccggggagttgggggaggtggcgggaagcctggtgagg
ctggagatccacaacgagggctccaggctgctggtgctgacagggctgcggcgtgtggcc
ggcctgacagagctgcagctgcaggactgccacctggaacgcctaccctcggccctgctg
gccctcaccagcctgcgcaccctggatctgcagcacaacagcctgcgcaccttggaggag
ctcctggggctggcgcacctccgccgcctctcctgcctcaggctggcccataaccgtatt
ctggccctaccggctagtgttggtgtgctgcgtgctctggagctcctggacctggggtac
aaccagctccagagccttcccccggccctcttcaacctccaccacctacgtcgcctccta
ctggctggcaacctgctggacaagctgccggcagaggtaggggcgctgacatttcttacc
gagctggacctgagtgggaacaggctggagagcctgcctccagagcttttcagtcgctgt
ttggagctgcggagcctgaatgtatcccacaactccctgggttccctgcctccagggctg
agcaacctgagccagctgtccaggctggacctgcgcagcaacagtctggaggagctgccc
atggagctgggcttctgttcaggactgcacggagaaggtctgctggtggaagactggctg
ctccatgcactgccacgccatttgaaggagttcctaacccagcctggctctcctactggc
aaatccttagaatcacactcccgtccagactcagatagcttcccctacttctcggctacc
cagtggagcttctcctccgctctggaatcacggatatag
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